| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is galE [H]
Identifier: 91212390
GI number: 91212390
Start: 3335897
End: 3336811
Strand: Direct
Name: galE [H]
Synonym: UTI89_C3398
Alternate gene names: 91212390
Gene position: 3335897-3336811 (Clockwise)
Preceding gene: 91212389
Following gene: 91212391
Centisome position: 65.85
GC content: 53.99
Gene sequence:
>915_bases ATGAATCAAACTGTCGCGGTGACGGGCGCTACCGGGTTTATCGGTAAATATATTATTGATAACCTGCTCGCCCGCGGCTT TCATGTTCGCGCATTGACGCGTACTGCCCGCGCTCACGTCAATGATAATCTCACTTGGGTGCGCGGTTCGCTGGAAGATA CACATTCGCTTAGCGAACTGGTTGCCGGAGCCAGCGCGGTGGTCCATTGCGCCGGGCAAGTGCGCGGGCACAAAGAAGAG ATTTTTACCCGCTGCAACGTTGACGGCAGCCTGCGCCTGATGCAAGCGGCAAAAGAGAGCGGCTTTTGCCAACGTTTTCT GTTTATCTCTTCGCTGGCGGCGCGCCATCCCGAACTCTCCTGGTACGCAAATTCCAAACACGTCGCTGAACAACGGCTGA CTGCAATGGCTGACGAAATTACGTTGGGCGTTTTTCGCCCGACAGCCGTGTATGGTCCCGGCGATAAAGAGTTAAAACCG CTGTTTGACTGGATGCTGCGCGGTCTGCTGCCACGACTTGGCACGCCAGAGACACAGCTCTCTTTTCTTCACGTCACCGA TTTTGCGCAAGCAGTGAGTCAGTGGTTAAGCGCCGAAACTGTACAGACGCAAACCTATGAATTATGCGATGGCGTCGCCG GAGGCTATGACTGGCAACGTGTCCAACAGCTTGTTGCCGATGTCCGCTGTGGTTCCGTGCGGATGGTCGGTATTCCTCAG CCGCTACTCACCTGCCTTGCGGATATCAGTACCGCGTTGAACCGTCTGGCGGGTAAAGAACCGATGCTGACTCGTTCGAA AATCCGTGAATTAACCCATGCCGACTGGTCGGCAAGTAATAACCGTATTTCTGAAGATATTAATTGGTTTCCCGGGATTA GCCTGGAACACGCATTACGCAACGGGCTATTTTGA
Upstream 100 bases:
>100_bases GTATTCCCCGAACATCCTCCGGCAAGCCTGCCCGTGCGGAAGCGAAAAAACGTTATCAGAAGGCTTATGCTGCCAGTCTT CATGTGCAGGAATCCCTGGC
Downstream 100 bases:
>100_bases TTGTCTTGTTTAAAGGTGTGTTAACGTTTCTATGGTAAATCGTGAAATAGTAATGGATTACATCCTTTCCTGTTTACAGG ATTTGGTCGAAAACGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSELVAGASAVVHCAGQVRGHKEE IFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELSWYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKP LFDWMLRGLLPRLGTPETQLSFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALRNGLF
Sequences:
>Translated_304_residues MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSELVAGASAVVHCAGQVRGHKEE IFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELSWYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKP LFDWMLRGLLPRLGTPETQLSFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALRNGLF >Mature_304_residues MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSELVAGASAVVHCAGQVRGHKEE IFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELSWYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKP LFDWMLRGLLPRLGTPETQLSFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALRNGLF
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 33649; Mature: 33649
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSEL CCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH VAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS HHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCE WYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGTPETQL EECCCHHHHHHHHHHHHHHHHHEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHH SFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCH PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHH NGLF CCCC >Mature Secondary Structure MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSEL CCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH VAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS HHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCE WYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGTPETQL EECCCHHHHHHHHHHHHHHHHHEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHH SFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCH PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHH NGLF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8820651; 10521656 [H]