Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
---|---|
Accession | NC_007941 |
Length | 114,230 |
Click here to switch to the map view.
The map label for this gene is traE [H]
Identifier: 91206353
GI number: 91206353
Start: 80141
End: 80707
Strand: Direct
Name: traE [H]
Synonym: UTI89_P108
Alternate gene names: 91206353
Gene position: 80141-80707 (Clockwise)
Preceding gene: 91206352
Following gene: 91206354
Centisome position: 70.16
GC content: 47.09
Gene sequence:
>567_bases ATGGAACACGGTGCCCGTTTAAGTACCAGTCGTGTAATGGCCATCGCCTTTATATTTATGTCAGTGCTTATTGTTCTCAG CCTCTCTGTTAACCTCATTCAGGGGGTGAATAACTACCGTCTTCAGAATGAGCAACGCACTGCCGTGACGCCAATGGCAT TTAATGCCCCCTTTGCCGTGTCACAGAACAGTGCCGACGCCTCTTATTTACAGCAGATGGCGCTGTCATTTATTGCCCTC CGTCTGAATGTTTCATCAGAAACCGTCGATGCCTCACATCAGGCGCTTCTGCAATATATCCGCCCGGGCGCACAGAACCA GATGAAAGTTATTCTGGCTGAAGAAGCGAAGCGTATTAAAAACGATAACGTGAACTCAGCCTTTTTCCAGACCAGTGTTC GTGTCTGGCCTCAGTATGGCCGTGTGGAAATTCGTGGTGTGCTTAAAACCTGGATAGGTGATTCAAAACCTTTCACTGGT ATCAAACATTACATCCTTATTCTGAAGCGGGAAAACGGGGTGACCTGGCTGGATAATTTCGGGGAAACAGACGATGAGAA AAAATAA
Upstream 100 bases:
>100_bases CTGGTATATGCCAACAGCCCTGCTGCGCGGTATTTTTCATAATGTTCCCGATTCGTGTTTCCGGCAGTGGATTAAATAGA ACTGATACCAGGATTGTTAT
Downstream 100 bases:
>100_bases TACGGCAATAATATTTGGCAGCCTGTTTTTTTCCTGCAGCGTGATGGCCGCAAACGGTACGCTGGCCCCCACCGTGGTGC CAATGGTGAACGGTGGTCAG
Product: conjugal transfer pilus assembly protein TraE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNLIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIAL RLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTG IKHYILILKRENGVTWLDNFGETDDEKK
Sequences:
>Translated_188_residues MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNLIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIAL RLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTG IKHYILILKRENGVTWLDNFGETDDEKK >Mature_188_residues MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNLIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIAL RLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTG IKHYILILKRENGVTWLDNFGETDDEKK
Specific function: Involved in F pilus assembly [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the traE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007973 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21181; Mature: 21181
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNLIQGVNNYRLQNEQRTAVTPMAFNAPFAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEECCEECCCCEEE SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHC NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTGIKHYILILKRENGVTWLDNF CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECCC GETDDEKK CCCCCCCC >Mature Secondary Structure MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNLIQGVNNYRLQNEQRTAVTPMAFNAPFAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEECCEECCCCEEE SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHC NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTGIKHYILILKRENGVTWLDNF CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECCC GETDDEKK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6090426; 7915817 [H]