Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is 91206285
Identifier: 91206285
GI number: 91206285
Start: 34958
End: 35980
Strand: Direct
Name: 91206285
Synonym: UTI89_P040
Alternate gene names: NA
Gene position: 34958-35980 (Clockwise)
Preceding gene: 91206284
Following gene: 91206286
Centisome position: 30.6
GC content: 52.59
Gene sequence:
>1023_bases ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGGATTCATTCGTTCTCTCTCGGTTCC TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG GCCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATGCGT TATGACACGCTGGAAACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCACGTCCCTGCGATCGCTGGCTCG AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTC GACAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA
Upstream 100 bases:
>100_bases CTGCAGGCGGATGCTGTCACGAACGGTGCAATAGTGCTCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCT CTCCTGATTCAGGAGAGTTT
Downstream 100 bases:
>100_bases TGATGGAACTGCAACATCAACGACTGATGGTGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCG CTGTCACAACAGGCAGTAGA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV IAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF DKHPLHHPLSIYDSFCRGVA
Sequences:
>Translated_340_residues MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV IAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF DKHPLHHPLSIYDSFCRGVA >Mature_340_residues MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV IAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF DKHPLHHPLSIYDSFCRGVA
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR017894 - InterPro: IPR001584 - InterPro: IPR006120 - InterPro: IPR012337 [H]
Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 39887; Mature: 39887
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEP HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC GRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR CCEEEECHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCH EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT HHHHHCHHHEEEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML HCCEEEEHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA CCCCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEP HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC GRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR CCEEEECHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCH EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT HHHHHCHHHEEEECCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML HCCEEEEHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA CCCCCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8382825 [H]