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The map label for this gene is 89885895

Identifier: 89885895

GI number: 89885895

Start: 175920

End: 176345

Strand: Reverse

Name: 89885895

Synonym: Rfer_4409

Alternate gene names: NA

Gene position: 176345-175920 (Counterclockwise)

Preceding gene: 89885896

Following gene: 89885894

Centisome position: 68.5

GC content: 58.22

Gene sequence:

>426_bases
ATGGCACTCGAACGTCAAATCCTTACCCGCGTGTTCATTTACGCGGGCGTCAAAATGCCCGACCCGGATGCAACGATGCA
ACCGGTTGCAGTCCGAGATTTCTTCGCAGCCGCTGGTCGCCCCGAACTCTCGAGCGCCGAAGTCCGCGGTCCTGAAGTTG
TCGGCAACGAATTGCAGTTCACGCTGCACCGTGCCGTCGGTACCAAAGGCCTCCAGGCAATGGTGAACATGGCCACAACG
GCTGAAGAAAAATTGGAACTCGCCAATATCAAGGTCCCGGGCTGGATCAGCGACCGTCTGGCTGGTTTCCGCAAGGGCGC
CATCCGGCCGCAAGCCCAAGTCAATAGCCTGATCGAGATTCTGTCCAAGTCAGGCAACGGTGATTGCATCCGGCCTCCGG
CTCAAGCCATTCCCTGGTTCTTCTGA

Upstream 100 bases:

>100_bases
GCGCGACGCCAACACCGGTTCTTCCGCTCTCGGTCACGTCAAACGCCCCCATGGGCGCTGACGAACTGTTCTAACCCCAT
TTCAAGACAAGGAAAAAAAC

Downstream 100 bases:

>100_bases
TGACAGCGGCCGTCTCGACGCTGTGCCTGCCGCGAATCTCGAAAGGGGTTCCATGCATAGTCACAGGCGAATCTGAAGGC
GGCTCCCTTGTGGCCTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MALERQILTRVFIYAGVKMPDPDATMQPVAVRDFFAAAGRPELSSAEVRGPEVVGNELQFTLHRAVGTKGLQAMVNMATT
AEEKLELANIKVPGWISDRLAGFRKGAIRPQAQVNSLIEILSKSGNGDCIRPPAQAIPWFF

Sequences:

>Translated_141_residues
MALERQILTRVFIYAGVKMPDPDATMQPVAVRDFFAAAGRPELSSAEVRGPEVVGNELQFTLHRAVGTKGLQAMVNMATT
AEEKLELANIKVPGWISDRLAGFRKGAIRPQAQVNSLIEILSKSGNGDCIRPPAQAIPWFF
>Mature_140_residues
ALERQILTRVFIYAGVKMPDPDATMQPVAVRDFFAAAGRPELSSAEVRGPEVVGNELQFTLHRAVGTKGLQAMVNMATTA
EEKLELANIKVPGWISDRLAGFRKGAIRPQAQVNSLIEILSKSGNGDCIRPPAQAIPWFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15377; Mature: 15246

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALERQILTRVFIYAGVKMPDPDATMQPVAVRDFFAAAGRPELSSAEVRGPEVVGNELQF
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHH
TLHRAVGTKGLQAMVNMATTAEEKLELANIKVPGWISDRLAGFRKGAIRPQAQVNSLIEI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LSKSGNGDCIRPPAQAIPWFF
HHCCCCCCEECCCHHCCCCCC
>Mature Secondary Structure 
ALERQILTRVFIYAGVKMPDPDATMQPVAVRDFFAAAGRPELSSAEVRGPEVVGNELQF
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHH
TLHRAVGTKGLQAMVNMATTAEEKLELANIKVPGWISDRLAGFRKGAIRPQAQVNSLIEI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LSKSGNGDCIRPPAQAIPWFF
HHCCCCCCEECCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA