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The map label for this gene is 89885856

Identifier: 89885856

GI number: 89885856

Start: 135792

End: 137546

Strand: Reverse

Name: 89885856

Synonym: Rfer_4370

Alternate gene names: NA

Gene position: 137546-135792 (Counterclockwise)

Preceding gene: 89885857

Following gene: 89885855

Centisome position: 53.43

GC content: 56.52

Gene sequence:

>1755_bases
ATGAGTTCAAAAAACATTGGCCGTGATGCCGATACCGATAGAACGCACCTGCTGCAAGACTGGACCGTCCGCTACGGCAC
TGACGCGTTGATCTTCAATTGCCAGGCAGAAAACATTGGTCATGCCATTTCGCAGTGCGCGAACGCCTATCCGGGCGACA
CCATTGTCAGCGCCTTCCTGGACGCACTGACGGGCACAAACTCCGTCATCGTCGCCTTGCCTGCGGCTTTCCAATTGATG
GTTGACGGCTCACCGCGAAGTGGCCCGTGGTTCGTCATTGTGGACAAGACAACCGGCGACCTGGCGCCCGATCTCGTGAT
CGGCGATGTCGCTTGTTACCAAAGCTACGATGAAGCCCGGCAAGCGCTGGACTTCAACCTAACCGAGTACGCGAAGGAGT
CGGCCCGAACGGCTCAACCATCGCAAGATTCGCCGCGACAAAGTGACGACGACGCGAAGCGAGCCCGCATTTCTGCGGCT
GGCTACACCATCCAAAGTCAGGGCATCGGAACCGCCATGGAAGGCTGGTGGGCGCTGCTGCCGGGTGAAACCGAGTTCCA
CGCCGCCGAAGAGGGCGAGAACCAAAACTACCTTGGTTTCTTCAGCAACGAGCAAGACTTGCTCGATGAACTCGACGATA
GCCTCACTGACAACGCGTTGAGTTCAAGCAAACTCTACACGGACGAAACGGGTTACACCGTCGAAATCAGCGCTATGGAC
ATGGAGAACGTTGCATTCGCACGCCAGGGCGGCGGATTGTTGGTGACCATGCCACGCAAGGAATTCGAGGCTAAATTCAA
ACCGACAACGGTGCCGGAATTCAGCCTGATTGGGGTGAAGGCCGAATGGCTGCCAGACGACCTGAAAGTCTATGCGTACT
CGCAAGGGCTGCGCTGGAACGGATGGGCCATGCCACGGTTCGAACTCTCTGCGGCGCTAAAACTGCTTGAGTACATCCCC
GAGCTGCGCTGGAATTCCGCACGCGATGAATTCAGACTCCAACCAGGCGAGCCTGAAGATGTCTGGACAGGTGAAGACGT
TCAGGTTGGCAACCGGACCCTGCATCTGTACCCGATCGGTGCGGGCTCATGGTGCTGGGATCAGGAGCGCGCGATACCCA
CGCTCGACGAAACGATTGCTCTCATGAAGAAAGAAATTCTTCTTGACGTGCGCGGCCGGCGCGTTCCCATGGACGTAAAG
ACCTTTTCGGATCTGCACGCTTATGTTGACGCCAACGAATATGGCGAATTTTGTGTTGACAGCGTTGCTGATGCCATGAT
TGCCTATTTCGGCGGCCGCGACGAGCACGAGGGCATGCCGGATCGAATGCTGGAGTACATCAATGCTGCACAGAACGCGA
TCAACGAATGGCTCGCGGCAGGCGGCTTGCTCACAGAAATTGGCCAACTGGCCGATGTCGAGCGGGCCAAACTTGAAACT
GACGGTGCACTGCTTCGCGAAAGAAAAGCACCTCATCCACTGGTCGGGCAATCGTTCACCGGGGAAGGCACTCCGTCAGC
AATTGACTCGTCAAACAGCAAAACGGCGATTGACATCGTTCTCGCGGTCTGCAATGACTTCGACGGCAACGGCATCTACA
GCGTCGGCACCAGTGCCGCCCTGCGGGCCATGGCCGTACATTGGCAACACCATATCGCCCAAGGCGATAACCCAAAAGTC
ATTTCGGATGACTTGGATGAAATGAGAAACCAGTTGGAAGTGATGCGCGCAGAAATCATGCGCCGTATCGCATAA

Upstream 100 bases:

>100_bases
CTCGCGCAATCGGCGGAGACGAACATTTGACAACCCTTCCGGGACCATCTTCCCGGCATAGCTGGGTTGGTTCCGGTCAT
CTTTCATGACAAGGAAACTT

Downstream 100 bases:

>100_bases
AGAACGTCCACCTGAAACGACCACCACCTGGCTTGCCAGGTGAACCCATCAAAACCTGCCCGAGGGATGCACTGTCCCTC
CGGGGCAGACATCACCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSSKNIGRDADTDRTHLLQDWTVRYGTDALIFNCQAENIGHAISQCANAYPGDTIVSAFLDALTGTNSVIVALPAAFQLM
VDGSPRSGPWFVIVDKTTGDLAPDLVIGDVACYQSYDEARQALDFNLTEYAKESARTAQPSQDSPRQSDDDAKRARISAA
GYTIQSQGIGTAMEGWWALLPGETEFHAAEEGENQNYLGFFSNEQDLLDELDDSLTDNALSSSKLYTDETGYTVEISAMD
MENVAFARQGGGLLVTMPRKEFEAKFKPTTVPEFSLIGVKAEWLPDDLKVYAYSQGLRWNGWAMPRFELSAALKLLEYIP
ELRWNSARDEFRLQPGEPEDVWTGEDVQVGNRTLHLYPIGAGSWCWDQERAIPTLDETIALMKKEILLDVRGRRVPMDVK
TFSDLHAYVDANEYGEFCVDSVADAMIAYFGGRDEHEGMPDRMLEYINAAQNAINEWLAAGGLLTEIGQLADVERAKLET
DGALLRERKAPHPLVGQSFTGEGTPSAIDSSNSKTAIDIVLAVCNDFDGNGIYSVGTSAALRAMAVHWQHHIAQGDNPKV
ISDDLDEMRNQLEVMRAEIMRRIA

Sequences:

>Translated_584_residues
MSSKNIGRDADTDRTHLLQDWTVRYGTDALIFNCQAENIGHAISQCANAYPGDTIVSAFLDALTGTNSVIVALPAAFQLM
VDGSPRSGPWFVIVDKTTGDLAPDLVIGDVACYQSYDEARQALDFNLTEYAKESARTAQPSQDSPRQSDDDAKRARISAA
GYTIQSQGIGTAMEGWWALLPGETEFHAAEEGENQNYLGFFSNEQDLLDELDDSLTDNALSSSKLYTDETGYTVEISAMD
MENVAFARQGGGLLVTMPRKEFEAKFKPTTVPEFSLIGVKAEWLPDDLKVYAYSQGLRWNGWAMPRFELSAALKLLEYIP
ELRWNSARDEFRLQPGEPEDVWTGEDVQVGNRTLHLYPIGAGSWCWDQERAIPTLDETIALMKKEILLDVRGRRVPMDVK
TFSDLHAYVDANEYGEFCVDSVADAMIAYFGGRDEHEGMPDRMLEYINAAQNAINEWLAAGGLLTEIGQLADVERAKLET
DGALLRERKAPHPLVGQSFTGEGTPSAIDSSNSKTAIDIVLAVCNDFDGNGIYSVGTSAALRAMAVHWQHHIAQGDNPKV
ISDDLDEMRNQLEVMRAEIMRRIA
>Mature_583_residues
SSKNIGRDADTDRTHLLQDWTVRYGTDALIFNCQAENIGHAISQCANAYPGDTIVSAFLDALTGTNSVIVALPAAFQLMV
DGSPRSGPWFVIVDKTTGDLAPDLVIGDVACYQSYDEARQALDFNLTEYAKESARTAQPSQDSPRQSDDDAKRARISAAG
YTIQSQGIGTAMEGWWALLPGETEFHAAEEGENQNYLGFFSNEQDLLDELDDSLTDNALSSSKLYTDETGYTVEISAMDM
ENVAFARQGGGLLVTMPRKEFEAKFKPTTVPEFSLIGVKAEWLPDDLKVYAYSQGLRWNGWAMPRFELSAALKLLEYIPE
LRWNSARDEFRLQPGEPEDVWTGEDVQVGNRTLHLYPIGAGSWCWDQERAIPTLDETIALMKKEILLDVRGRRVPMDVKT
FSDLHAYVDANEYGEFCVDSVADAMIAYFGGRDEHEGMPDRMLEYINAAQNAINEWLAAGGLLTEIGQLADVERAKLETD
GALLRERKAPHPLVGQSFTGEGTPSAIDSSNSKTAIDIVLAVCNDFDGNGIYSVGTSAALRAMAVHWQHHIAQGDNPKVI
SDDLDEMRNQLEVMRAEIMRRIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64542; Mature: 64410

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKNIGRDADTDRTHLLQDWTVRYGTDALIFNCQAENIGHAISQCANAYPGDTIVSAFL
CCCCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHH
DALTGTNSVIVALPAAFQLMVDGSPRSGPWFVIVDKTTGDLAPDLVIGDVACYQSYDEAR
HHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHH
QALDFNLTEYAKESARTAQPSQDSPRQSDDDAKRARISAAGYTIQSQGIGTAMEGWWALL
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCEEEECCCCCCHHCCCEEEC
PGETEFHAAEEGENQNYLGFFSNEQDLLDELDDSLTDNALSSSKLYTDETGYTVEISAMD
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECC
MENVAFARQGGGLLVTMPRKEFEAKFKPTTVPEFSLIGVKAEWLPDDLKVYAYSQGLRWN
CHHHHHEECCCCEEEEECHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
GWAMPRFELSAALKLLEYIPELRWNSARDEFRLQPGEPEDVWTGEDVQVGNRTLHLYPIG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEEECC
AGSWCWDQERAIPTLDETIALMKKEILLDVRGRRVPMDVKTFSDLHAYVDANEYGEFCVD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
SVADAMIAYFGGRDEHEGMPDRMLEYINAAQNAINEWLAAGGLLTEIGQLADVERAKLET
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
DGALLRERKAPHPLVGQSFTGEGTPSAIDSSNSKTAIDIVLAVCNDFDGNGIYSVGTSAA
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHH
LRAMAVHWQHHIAQGDNPKVISDDLDEMRNQLEVMRAEIMRRIA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSKNIGRDADTDRTHLLQDWTVRYGTDALIFNCQAENIGHAISQCANAYPGDTIVSAFL
CCCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHH
DALTGTNSVIVALPAAFQLMVDGSPRSGPWFVIVDKTTGDLAPDLVIGDVACYQSYDEAR
HHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHH
QALDFNLTEYAKESARTAQPSQDSPRQSDDDAKRARISAAGYTIQSQGIGTAMEGWWALL
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCEEEECCCCCCHHCCCEEEC
PGETEFHAAEEGENQNYLGFFSNEQDLLDELDDSLTDNALSSSKLYTDETGYTVEISAMD
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECC
MENVAFARQGGGLLVTMPRKEFEAKFKPTTVPEFSLIGVKAEWLPDDLKVYAYSQGLRWN
CHHHHHEECCCCEEEEECHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
GWAMPRFELSAALKLLEYIPELRWNSARDEFRLQPGEPEDVWTGEDVQVGNRTLHLYPIG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEEECC
AGSWCWDQERAIPTLDETIALMKKEILLDVRGRRVPMDVKTFSDLHAYVDANEYGEFCVD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
SVADAMIAYFGGRDEHEGMPDRMLEYINAAQNAINEWLAAGGLLTEIGQLADVERAKLET
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
DGALLRERKAPHPLVGQSFTGEGTPSAIDSSNSKTAIDIVLAVCNDFDGNGIYSVGTSAA
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHH
LRAMAVHWQHHIAQGDNPKVISDDLDEMRNQLEVMRAEIMRRIA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA