The gene/protein map for NC_007901 is currently unavailable.
Definition Rhodoferax ferrireducens T118 plasmid1, complete sequence.
Accession NC_007901
Length 257,447

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The map label for this gene is trfA [H]

Identifier: 89885774

GI number: 89885774

Start: 45755

End: 46561

Strand: Reverse

Name: trfA [H]

Synonym: Rfer_4287

Alternate gene names: 89885774

Gene position: 46561-45755 (Counterclockwise)

Preceding gene: 89885776

Following gene: 89885773

Centisome position: 18.09

GC content: 50.31

Gene sequence:

>807_bases
ATGGCCGTATCGTGCCTTTTCACGGCAGCAAGAGGTGAACGCAAGATTTACGGCAAGTTGACGCCTGTCTACTGTGAGGC
CAACCTGGAGGTTTACTTCAAGGGCGAAGAGCTCCGCGAGGATACTGATAAATTGGTCTGGCTGCAGCTCATGCACATGG
CCCGAGGTCGCACCTTCAATGAAGAAGACCAAGTCGAGGTTACTTTTACTGCCAATCGATTTTTGAACGATTTGGGATGG
GACAACAGCGGGGCTTGTTACAAGAGGCTCTCCGATGCTTTGGACCGTTTACAGAACGCACAAATCAAAGTGATGGGCAA
ACGCAATGGCCGCAAGACAGGGTGGATCACAATGTCTTACGTCTCAAACGTTGCGGTGGGACATATAGCAGGCAAGGCCA
TGAATAAGGTAGGGCCGAATACTCGGTGGACTGTTCGCATGGATCATTTCGCTGCCCATATGTACCAGGCCGGGATGATC
GAGATCAAATCAGACCAGCAGTACAAAGAGTTGCGCACTATGAGTCGGAAAATACTCGACATGGTGCTCGCCTCCCCTAC
CGATTTGATCTCAATTCACAGAGACGACTTTATAAAATTCCTCGGGTTGAACCCGACCAACATTAGAAGCGCAAAGCAAA
ATATCAAAGTCGCGCTAGAAGAACTGCGGAGCCCTGGATACATCCATCACTTCGCATTTGACGCTGCCAATGTCCTGCAC
ATCAATAGGACGGCCGAGGCTCCGATCAATCGGGGCACACCACCCAACATCAGAATTCACAAGGCGCCCGAAATGGAAAA
CAACTAA

Upstream 100 bases:

>100_bases
GTTTGAGATCAGTTTTCCAGAAACCGCCGCGAATCCAGTCTTGGATGAAGTGGCGGTTTTGCCGTCATGGTCGGAAAACA
TACGTGGGTTTCCTGTGCAG

Downstream 100 bases:

>100_bases
AAGACTGCCTCTAGAAACGACAAAGGCTCCGATTTGCACTCGGAGCCTTTGAAGTCACCCAAAGGGTGAGACATAACCCA
CCGGATCAGGATGGTGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MAVSCLFTAARGERKIYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMHMARGRTFNEEDQVEVTFTANRFLNDLGW
DNSGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWITMSYVSNVAVGHIAGKAMNKVGPNTRWTVRMDHFAAHMYQAGMI
EIKSDQQYKELRTMSRKILDMVLASPTDLISIHRDDFIKFLGLNPTNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLH
INRTAEAPINRGTPPNIRIHKAPEMENN

Sequences:

>Translated_268_residues
MAVSCLFTAARGERKIYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMHMARGRTFNEEDQVEVTFTANRFLNDLGW
DNSGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWITMSYVSNVAVGHIAGKAMNKVGPNTRWTVRMDHFAAHMYQAGMI
EIKSDQQYKELRTMSRKILDMVLASPTDLISIHRDDFIKFLGLNPTNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLH
INRTAEAPINRGTPPNIRIHKAPEMENN
>Mature_267_residues
AVSCLFTAARGERKIYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMHMARGRTFNEEDQVEVTFTANRFLNDLGWD
NSGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWITMSYVSNVAVGHIAGKAMNKVGPNTRWTVRMDHFAAHMYQAGMIE
IKSDQQYKELRTMSRKILDMVLASPTDLISIHRDDFIKFLGLNPTNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLHI
NRTAEAPINRGTPPNIRIHKAPEMENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010751 [H]

Pfam domain/function: PF07042 TrfA [H]

EC number: NA

Molecular weight: Translated: 30586; Mature: 30454

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSCLFTAARGERKIYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMHMARGRTFN
CCEEEEEEECCCCEEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
EEDQVEVTFTANRFLNDLGWDNSGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWITMSY
CCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECCEEHHH
VSNVAVGHIAGKAMNKVGPNTRWTVRMDHFAAHMYQAGMIEIKSDQQYKELRTMSRKILD
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
MVLASPTDLISIHRDDFIKFLGLNPTNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLH
HHHCCCHHHEEECHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
INRTAEAPINRGTPPNIRIHKAPEMENN
EECCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
AVSCLFTAARGERKIYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMHMARGRTFN
CEEEEEEECCCCEEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
EEDQVEVTFTANRFLNDLGWDNSGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWITMSY
CCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECCEEHHH
VSNVAVGHIAGKAMNKVGPNTRWTVRMDHFAAHMYQAGMIEIKSDQQYKELRTMSRKILD
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
MVLASPTDLISIHRDDFIKFLGLNPTNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLH
HHHCCCHHHEEECHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
INRTAEAPINRGTPPNIRIHKAPEMENN
EECCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6374158 [H]