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The map label for this gene is 89885765

Identifier: 89885765

GI number: 89885765

Start: 34865

End: 35770

Strand: Reverse

Name: 89885765

Synonym: Rfer_4278

Alternate gene names: NA

Gene position: 35770-34865 (Counterclockwise)

Preceding gene: 89885766

Following gene: 89885764

Centisome position: 13.89

GC content: 55.41

Gene sequence:

>906_bases
GTGCAGGATGCACCTCCAATTTACGGGGTCACGCCTCTGGACAATTACGTGTTCCGGGAAGATCTGATCCGGGACATGCT
GGTTTTTTGGCGTTTGAACTTTCGTTCTTGCATGTTGACCGGCCACAAGGGCTCGGGCAAGACATCCATTGTCGAGCAGT
TCCACCACCGGGTGGGTTCCAATCTGCAGGTTATGACCGGCAACGGCAAAACCACGCTGGAGGCCCTTTTCGGCCAATAC
GTGCTCAATGAGCAGGGCAAGTTGATCTGGCAAGACGCGCCAGTGACCAGTGCAGCTCGGCATGGCCACTCTGTGTTGAT
CAACGAGTTCAACGCCATGCCTGAGGATGTGCAAATTGCACTCAACGATGTAGCCCACGAGGGCGCACCGATCTCGCTTC
CTGAGGCGGGTGAGCAATTCATGCCAGCCCAAGGATTCCGGATCTACGGCACCATTAATCCCAAAGGCTCCAACGACTTC
ATGTACCGGGGCCGCAAGGAAATGGATGCGGCATTGAAGGAACGCTTTTTCTGGATCAATGTGTCTTACGGAACACGGGC
GGAAGAGGAAGCGATTTTGCTCAGTGTCTGGCGCAAATACAGCGGGACCAGCGAAGAGGACTCCAAATTGCTGGTTGGCA
AGATGCTTGATGTGGCAGAGGACATACGCAAGCAGTCGGAGTCCACGGGGGCAGATGCGATACCGGAAATCATTTCCACG
CGCGTCCTGTGCAACTGGGCCATTTTCTGGATCCAATACTCCAAGCGCCCAGGTGCTGCTCACATGGGCCTGCAGCGGGC
GCTCACATTTTCGTGCCGTCCGGAAGTTGCGTACGAGATTCACAAGATCGTGGAATTGAAGACCAGTGTGCCGTCGCCCT
ACACGTTGTCTGGAATGACGCGATGA

Upstream 100 bases:

>100_bases
CCCGTCGAAGCGGTCGATTCCAACCCAATTAAGGAAATGCCATATGGCTACCAAGACAATTCAAGAGCTGTTCGGGACGA
ACTCATCAGTTCAAATTGAG

Downstream 100 bases:

>100_bases
CGATCAATTTTCCCCTTGTGATTGAAGGGGAGACGTCGGACCTGCAGGTTCATGCGCCGGGGTTTCTCACCGAAGTCAAG
AGAGGCTTGGGCGGGGTGGA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MQDAPPIYGVTPLDNYVFREDLIRDMLVFWRLNFRSCMLTGHKGSGKTSIVEQFHHRVGSNLQVMTGNGKTTLEALFGQY
VLNEQGKLIWQDAPVTSAARHGHSVLINEFNAMPEDVQIALNDVAHEGAPISLPEAGEQFMPAQGFRIYGTINPKGSNDF
MYRGRKEMDAALKERFFWINVSYGTRAEEEAILLSVWRKYSGTSEEDSKLLVGKMLDVAEDIRKQSESTGADAIPEIIST
RVLCNWAIFWIQYSKRPGAAHMGLQRALTFSCRPEVAYEIHKIVELKTSVPSPYTLSGMTR

Sequences:

>Translated_301_residues
MQDAPPIYGVTPLDNYVFREDLIRDMLVFWRLNFRSCMLTGHKGSGKTSIVEQFHHRVGSNLQVMTGNGKTTLEALFGQY
VLNEQGKLIWQDAPVTSAARHGHSVLINEFNAMPEDVQIALNDVAHEGAPISLPEAGEQFMPAQGFRIYGTINPKGSNDF
MYRGRKEMDAALKERFFWINVSYGTRAEEEAILLSVWRKYSGTSEEDSKLLVGKMLDVAEDIRKQSESTGADAIPEIIST
RVLCNWAIFWIQYSKRPGAAHMGLQRALTFSCRPEVAYEIHKIVELKTSVPSPYTLSGMTR
>Mature_301_residues
MQDAPPIYGVTPLDNYVFREDLIRDMLVFWRLNFRSCMLTGHKGSGKTSIVEQFHHRVGSNLQVMTGNGKTTLEALFGQY
VLNEQGKLIWQDAPVTSAARHGHSVLINEFNAMPEDVQIALNDVAHEGAPISLPEAGEQFMPAQGFRIYGTINPKGSNDF
MYRGRKEMDAALKERFFWINVSYGTRAEEEAILLSVWRKYSGTSEEDSKLLVGKMLDVAEDIRKQSESTGADAIPEIIST
RVLCNWAIFWIQYSKRPGAAHMGLQRALTFSCRPEVAYEIHKIVELKTSVPSPYTLSGMTR

Specific function: Unknown

COG id: COG5271

COG function: function code R; AAA ATPase containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]

Homologues:

Organism=Homo sapiens, GI24415404, Length=225, Percent_Identity=25.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323135, Length=157, Percent_Identity=29.2993630573248, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI161076562, Length=185, Percent_Identity=26.4864864864865, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161076560, Length=185, Percent_Identity=26.4864864864865, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011704
- InterPro:   IPR013615
- InterPro:   IPR001270 [H]

Pfam domain/function: PF07728 AAA_5; PF08406 CbbQ_C [H]

EC number: NA

Molecular weight: Translated: 33882; Mature: 33882

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDAPPIYGVTPLDNYVFREDLIRDMLVFWRLNFRSCMLTGHKGSGKTSIVEQFHHRVGS
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHCC
NLQVMTGNGKTTLEALFGQYVLNEQGKLIWQDAPVTSAARHGHSVLINEFNAMPEDVQIA
CEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCEEEEEHHCCCCHHHHHH
LNDVAHEGAPISLPEAGEQFMPAQGFRIYGTINPKGSNDFMYRGRKEMDAALKERFFWIN
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHCEEEEE
VSYGTRAEEEAILLSVWRKYSGTSEEDSKLLVGKMLDVAEDIRKQSESTGADAIPEIIST
ECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RVLCNWAIFWIQYSKRPGAAHMGLQRALTFSCRPEVAYEIHKIVELKTSVPSPYTLSGMT
HHHHHEEEEEEEECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCEECCCCC
R
C
>Mature Secondary Structure
MQDAPPIYGVTPLDNYVFREDLIRDMLVFWRLNFRSCMLTGHKGSGKTSIVEQFHHRVGS
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHCC
NLQVMTGNGKTTLEALFGQYVLNEQGKLIWQDAPVTSAARHGHSVLINEFNAMPEDVQIA
CEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCEEEEEHHCCCCHHHHHH
LNDVAHEGAPISLPEAGEQFMPAQGFRIYGTINPKGSNDFMYRGRKEMDAALKERFFWIN
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHCEEEEE
VSYGTRAEEEAILLSVWRKYSGTSEEDSKLLVGKMLDVAEDIRKQSESTGADAIPEIIST
ECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RVLCNWAIFWIQYSKRPGAAHMGLQRALTFSCRPEVAYEIHKIVELKTSVPSPYTLSGMT
HHHHHEEEEEEEECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCEECCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA