Click here to switch to the map view.

The map label for this gene is 89885764

Identifier: 89885764

GI number: 89885764

Start: 34152

End: 34868

Strand: Reverse

Name: 89885764

Synonym: Rfer_4277

Alternate gene names: NA

Gene position: 34868-34152 (Counterclockwise)

Preceding gene: 89885765

Following gene: 89885763

Centisome position: 13.54

GC content: 55.37

Gene sequence:

>717_bases
ATGACGATCAATTTTCCCCTTGTGATTGAAGGGGAGACGTCGGACCTGCAGGTTCATGCGCCGGGGTTTCTCACCGAAGT
CAAGAGAGGCTTGGGCGGGGTGGAACCCCTGACGCATCATGGGCGGCGCAGCGCGATCTGCATCGCAGATCTAGTCCTGC
AGACGCAAGACGACCGGCTGCGCTTGTCCGATGCACTGCAGGCGCTCCCCGATGAGTGGGCAATGGCTTTCCATGGCGTC
GAGGCACCGGTGAAAACGGCGGCCTCACAGGTGGCGGCAACCATGTCACGACTTGAATCCGGTATTGCGCTGGCCTTCTC
GCCTTACGAGCCAACGATTGAGGCCGCGATTACCGATGCCAAAGGTGAGATCCTGGTGCTACTCCAACAAAGCTGTCAGA
CGGGAAGCCCTAGCGCAGCGCGAAATTCGAAATACCTCTCGGCCCACGTGACCAGGAGGGCTCATAGTGGTGCAGTGTTC
GGGGCCATCCACGAGTTTTGCTCTAGCAACGAGATAACGGTGCATTGCTGTGATCCCGACCAGGGGTACCAAGTTACAAG
ATGGGATTTTTCAAGGACAGAACAGGCAAGAGCCTTTCTTGAAGAGTTTGATACCCATCTGGACGATCTTGAATACTGTC
GAAAGTCCGGACTCCTGCAATTTTGCAGACTAGACCTGGCTCAGATCATCAAGGCAACAAACATTTTGGACTTCTAA

Upstream 100 bases:

>100_bases
TCACATTTTCGTGCCGTCCGGAAGTTGCGTACGAGATTCACAAGATCGTGGAATTGAAGACCAGTGTGCCGTCGCCCTAC
ACGTTGTCTGGAATGACGCG

Downstream 100 bases:

>100_bases
GTCCGACAGACAACCGCGTAACGCGCGGAAAGGAAAAAATATGATGAAATTGATTGAAACCATAGTGGGCCTCCTTGTGG
CCATTGTGATGGGGGTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTINFPLVIEGETSDLQVHAPGFLTEVKRGLGGVEPLTHHGRRSAICIADLVLQTQDDRLRLSDALQALPDEWAMAFHGV
EAPVKTAASQVAATMSRLESGIALAFSPYEPTIEAAITDAKGEILVLLQQSCQTGSPSAARNSKYLSAHVTRRAHSGAVF
GAIHEFCSSNEITVHCCDPDQGYQVTRWDFSRTEQARAFLEEFDTHLDDLEYCRKSGLLQFCRLDLAQIIKATNILDF

Sequences:

>Translated_238_residues
MTINFPLVIEGETSDLQVHAPGFLTEVKRGLGGVEPLTHHGRRSAICIADLVLQTQDDRLRLSDALQALPDEWAMAFHGV
EAPVKTAASQVAATMSRLESGIALAFSPYEPTIEAAITDAKGEILVLLQQSCQTGSPSAARNSKYLSAHVTRRAHSGAVF
GAIHEFCSSNEITVHCCDPDQGYQVTRWDFSRTEQARAFLEEFDTHLDDLEYCRKSGLLQFCRLDLAQIIKATNILDF
>Mature_237_residues
TINFPLVIEGETSDLQVHAPGFLTEVKRGLGGVEPLTHHGRRSAICIADLVLQTQDDRLRLSDALQALPDEWAMAFHGVE
APVKTAASQVAATMSRLESGIALAFSPYEPTIEAAITDAKGEILVLLQQSCQTGSPSAARNSKYLSAHVTRRAHSGAVFG
AIHEFCSSNEITVHCCDPDQGYQVTRWDFSRTEQARAFLEEFDTHLDDLEYCRKSGLLQFCRLDLAQIIKATNILDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26161; Mature: 26030

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINFPLVIEGETSDLQVHAPGFLTEVKRGLGGVEPLTHHGRRSAICIADLVLQTQDDRL
CEEECCEEEECCCCCEEEECCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCHH
RLSDALQALPDEWAMAFHGVEAPVKTAASQVAATMSRLESGIALAFSPYEPTIEAAITDA
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHEEECC
KGEILVLLQQSCQTGSPSAARNSKYLSAHVTRRAHSGAVFGAIHEFCSSNEITVHCCDPD
CCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
QGYQVTRWDFSRTEQARAFLEEFDTHLDDLEYCRKSGLLQFCRLDLAQIIKATNILDF
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TINFPLVIEGETSDLQVHAPGFLTEVKRGLGGVEPLTHHGRRSAICIADLVLQTQDDRL
EEECCEEEECCCCCEEEECCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCHH
RLSDALQALPDEWAMAFHGVEAPVKTAASQVAATMSRLESGIALAFSPYEPTIEAAITDA
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHEEECC
KGEILVLLQQSCQTGSPSAARNSKYLSAHVTRRAHSGAVFGAIHEFCSSNEITVHCCDPD
CCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
QGYQVTRWDFSRTEQARAFLEEFDTHLDDLEYCRKSGLLQFCRLDLAQIIKATNILDF
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA