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The map label for this gene is 89885745

Identifier: 89885745

GI number: 89885745

Start: 12974

End: 14875

Strand: Reverse

Name: 89885745

Synonym: Rfer_4258

Alternate gene names: NA

Gene position: 14875-12974 (Counterclockwise)

Preceding gene: 89885746

Following gene: 89885744

Centisome position: 5.78

GC content: 54.0

Gene sequence:

>1902_bases
ATGTGCTTCTTCCAAAAATGTCGTGCCTTGTTGGGGGCCTTGATTATTCTGTCAATTCCTGTGCCAGGCCTAACTGCAGC
GGCCGCGGACGGTACGGATTTGTCCACATGCACCCTAAGTCCAGGTGGGACTCTCTATACATGCGGAGGCGGCGCGATTT
ACAACCTTAACGGCACGTTAAACACCGCGCCACTCGTGGGTCCTGGAGCGCCAGGAGAGGCACCCATGAGGCCGATTTCG
GATTCTGAACTTCATCAGGTAGACATGGCATCGACCATCGTTAACATGATGGATGGATTCTTCCGCCCAATCGACAGAAT
GGCCTCATTTTTTACGGGCTCTGGCACGAATATTGTCTATGCGCTTGTCCTTATAACCATCGCGATGGGAGGCATCCAAC
TGGCTGCGGGGACAACTGATCTCTTTGATCTGGCCATTCAGGGAATCAAACTTAGCTTTGTGGGGTCGCTTGTCTTGGCA
TGTATGGTGGACCAAGCATGGCTTGGGTATCTGACTGGGACTGGTCCGACCACCATACCAAAAGAAATCGAGCGGGGGTT
CATGTCAATCATGTCGGGGTTCTCGCCGACATTCGCCGGCACATCAGTATCATCTTCGTCAGGCGAATTTCTCGGGGCGG
TGATAAGCGATCTGTTTACGTCCATCAAAATTATGATGGGACTTTCGTTCTGGGACCGCGGCCTTTCTAATCCTTTGACA
ATCGTTTCATCGTTTATAACCCTTATTCCGACGATTTTGTTGTGGGTGTTTTCTGTGATCGCTTTCTGTATTGCTGGTGC
ACTTATCCTGGGAGAAGCCTTTGCAACAGTAATCGCAATCAAGCTCGCATTTGCATTCACCGGCTTACTGGTCCCGTGGT
TGCTGTTTCGCCCGCTCCAGTTTCTTTTTGACGCGTGGCTAAAAACGTTACTCATCAGCTTCACGGCATTAGTCATTGCC
GCATTGTTTGTGGCTGGGATGGCGAGCTTTGGAACAGCTATTCAAGCCGAATTGGCTAGGATTCCGACGACCGGATTTTT
TAGTGGGCCGCAAATTCAGGCCATTATGAGTCCCGTTTTTATTGGATCGCTTATTCTGATAACAATCGCAACTAAAGTTA
ACAGCATGGCTCAAACGCTGCTTAGCGGCGGTGCGCTTTCTGGAATTGGCATTCATGCTTTCAGCCAGGCGATGAAGGCG
ACGCAGGGAGTTACGTCGGCACCTGGTGGCGCGGCGGCAAAGGCCTCTGGGATGACCAGCGCTGGCGCCAACATGGCAAA
ATCTGTCGCATCCAAGGGTATGAGCATGGGTAAGTCTGCCGCTTCCGGCATCGGCGCGGTTGCGGGCGCGGCAAAGGCCG
CGGCCAGCCCAGGACTGGGATCTGCAAAAACCGCCTTTGGGAACGCAATGAAGGGCCCAGGCGGTTCCGTAATGGCCGGG
GCAAAGGCTGCATTACCCGGGATTCGCTCGGCCGGGGCGGGAGTGATGCGCGCGACAGCATCTGGCGCCAAGTCGGCTGC
GGTGGGCGGTCTCCAAGCAGCGGGGGGCGGCATCAAGTCTGCAGCGCAATCGATTGCAAATCCAGCATCCTTTGGCCAGT
CTGCAACGGCCTCAATAGCCACTAATAAAGGATTGGCGCCAACAAAACAGGAATCCCAACAGGCAACCCGGGCTGGAAAT
AGAGCCTTTAACGAGGCTCTTGCAGAGGGTAAGGGATTCTCACATGCTCAGATTGTTGGTAAACGTGCAGTTTCGGGATC
TCTAGTAACCGCCAGTAAAGCGCCTTCGACCCCGAAATCTGCCGGTGCAGCTTCACCCGCAACACCGCCCACACCGACTA
CACCTGCTCAATCTGCCGGTAGATTTCGCCCACTTCGCCCAACCAAGAAGGGAAACCCATAG

Upstream 100 bases:

>100_bases
ACGAGGAAAAGAATGCAGCAGATGCCAAACGGCATGGCGACGATACTTGGAATAGACTGATAGGCGGATTCAGGAAGAAA
TAATCTTTCAGTAAATTGAC

Downstream 100 bases:

>100_bases
AAGGGTGGCAGCACGGTCAGCGTGTTATCCGCAAGTGATCACGCGATCGCTTCGGTTGACCTGTGGTGACAGACACTTCA
CGGGCAAAGGTAAATTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTLNTAPLVGPGAPGEAPMRPIS
DSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVYALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLA
CMVDQAWLGYLTGTGPTTIPKEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQFLFDAWLKTLLISFTALVIA
ALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVFIGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKA
TQGVTSAPGGAAAKASGMTSAGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIATNKGLAPTKQESQQATRAGN
RAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKSAGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP

Sequences:

>Translated_633_residues
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTLNTAPLVGPGAPGEAPMRPIS
DSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVYALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLA
CMVDQAWLGYLTGTGPTTIPKEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQFLFDAWLKTLLISFTALVIA
ALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVFIGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKA
TQGVTSAPGGAAAKASGMTSAGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIATNKGLAPTKQESQQATRAGN
RAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKSAGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP
>Mature_633_residues
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTLNTAPLVGPGAPGEAPMRPIS
DSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVYALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLA
CMVDQAWLGYLTGTGPTTIPKEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQFLFDAWLKTLLISFTALVIA
ALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVFIGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKA
TQGVTSAPGGAAAKASGMTSAGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIATNKGLAPTKQESQQATRAGN
RAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKSAGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63549; Mature: 63549

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCC
NTAPLVGPGAPGEAPMRPISDSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLACMVDQAWLGYLTGTGPTTIP
HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFDAWLKTLLISFTALVIAALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKATQGVTSAPGGAAAKASGMTS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCH
AGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEECC
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIA
CHHHCCCCHHCCCCHHHHHHCCCHHHHHCCHHHCCCHHHHHHHHHCCHHHCCCCCHHHHH
TNKGLAPTKQESQQATRAGNRAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCCCC
AGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCFFQKCRALLGALIILSIPVPGLTAAAADGTDLSTCTLSPGGTLYTCGGGAIYNLNGTL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCC
NTAPLVGPGAPGEAPMRPISDSELHQVDMASTIVNMMDGFFRPIDRMASFFTGSGTNIVY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALVLITIAMGGIQLAAGTTDLFDLAIQGIKLSFVGSLVLACMVDQAWLGYLTGTGPTTIP
HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KEIERGFMSIMSGFSPTFAGTSVSSSSGEFLGAVISDLFTSIKIMMGLSFWDRGLSNPLT
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IVSSFITLIPTILLWVFSVIAFCIAGALILGEAFATVIAIKLAFAFTGLLVPWLLFRPLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFDAWLKTLLISFTALVIAALFVAGMASFGTAIQAELARIPTTGFFSGPQIQAIMSPVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IGSLILITIATKVNSMAQTLLSGGALSGIGIHAFSQAMKATQGVTSAPGGAAAKASGMTS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCH
AGANMAKSVASKGMSMGKSAASGIGAVAGAAKAAASPGLGSAKTAFGNAMKGPGGSVMAG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEECC
AKAALPGIRSAGAGVMRATASGAKSAAVGGLQAAGGGIKSAAQSIANPASFGQSATASIA
CHHHCCCCHHCCCCHHHHHHCCCHHHHHCCHHHCCCHHHHHHHHHCCHHHCCCCCHHHHH
TNKGLAPTKQESQQATRAGNRAFNEALAEGKGFSHAQIVGKRAVSGSLVTASKAPSTPKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCCCC
AGAASPATPPTPTTPAQSAGRFRPLRPTKKGNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA