The gene/protein map for NC_007880 is currently unavailable.
Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is chiA1 [H]

Identifier: 89256806

GI number: 89256806

Start: 1449357

End: 1451651

Strand: Reverse

Name: chiA1 [H]

Synonym: FTL_1521

Alternate gene names: 89256806

Gene position: 1451651-1449357 (Counterclockwise)

Preceding gene: 89256810

Following gene: 89256805

Centisome position: 76.56

GC content: 36.38

Gene sequence:

>2295_bases
ATGAACAAAACAAAATTAGTCTCAGTAGTATGTGCATTGATGGGTTTGGGATCATATTCACTGCTAGAAGCAGCGCCTGT
AAATGATGTTAAAACATATGACTTCAAAGCACCATTTAAGGATTATAATAACAAAATAGTCCTAAGTATCAACAATGTAC
CATCAGCAAAAGTAGTTGAATTTACAAGTAACTTTAAACCAAAAACTGGTTGGGGTAGTTGTTTTGGTACTCGAGCAGAT
CTTGTTAATTTTGAAACAACACAACTAAGTAATGGAGAATACCTAACAAAATTATCGCTTAAAGATAGTGAAGGTTCGTT
AGATCTAACTCAAACATGTGACATTATGGGTACTGACTCTGGTAATGCACTAGTATTGCCAGGTGTGGTTGTTCCTATCG
TTAGTAGTGTAAAAGTTGATGGCAAAGATTTAGAAATTGAAAGACCGTGTGCAGATAATGTTTGTGAGAATCCAACTCCA
GGATACACTAATGCTGCATACTATGCTCAATGGGCAGTTTGGGGACGTAAATATAATCCATATGACTTCAAATATGATAA
GTTAAATACTATAATCTATGCATTTATAGGTTTTGATAAAAATACTGGCAATATAAAAACACTAGATGCTTCAGCTGACT
CATGGGGATTATCAGCATCAGCAAGAGCAGCTAAAAAATATCCTTATCTAAAATCATTCTTATCATTTGGTGGTTGGACT
AATAATGGTGTGACAACAGCACCAATGTTTGAGCAGTTAGCTTCAAATCAGCAAAGTATGGAAAACTTTGCTAAGCAGTC
AGTTGAGCTGATGCGTAAGCTTGGCTTTAATGGTATTGATATTGACTGGGAGTGGTGGTCAGATTATGGTGATGATGTTG
CTCCAGCTAAAAAGATGTTGGCTTTCTTTAAGGTTTTACGTGCTGAGTTAGACAAAGCTAGTAAAGCAGATGGTAAAAAA
TATTACCTTGCAATAGCTGTAAATGGTGCGAGAAGTCGTATTGAAGCAATGGAAAACCCTAATAATCCAAATAGTGTTGC
AGATTTCTGGAAGCAAACTGGCAAGCTTATGGATGAAATTAATATTATGAACTACGACTATCAAGGTGGTTGGGGTACTG
GTGCACCAGCTTGGTTCCAAGCATCAGCAGCATTCCCGAATATCAACTTCTCTCCAGAGGTTGCTAATTCAATTGGTAAA
ACAGGTGGTTGGTCAGTACAAGGCTCGGTAGATGCTTATATCAAAGCGGGTGTTCCTGCTAAGAAACTAATTGTTGGTTT
ACCACTATACGCTAGATCAATGACTGTGGCTAGTGATACTGATGGAGGTTTGTTACAGACTATTACAGCACCTGGATTTG
GTGACTATGAAGCAGGGGTATTTGATTATAAATGTTTGATTAATCCTGTAAATGATCCTGTAAATGGTTGCGGTACTGCA
AAACCTATCAGCGGTTTATCAGATCTAGTTTATTATGATATCAGTTCAAATGTTGATATCTTTAACAAGTACGGTAAAGT
AGCAATGCAACCATGGGCATATAGTCCATCAACGAAGACTTTTGTAACTTTTGATGATGTATGGTCTGTAAATGAAAAAA
CTAAGTATGCTAAGAGTAAAAATCTTGGTGGTACTATGTTCTGGCAAGCAGATGGTGACTCAACAGATACTAACAAATCA
CTAATTAATGCTGTAGCTAAAGTTTATGCTTCTGATACAATTAATGTATCTGTTAGCGATGTTACTGAGAATTCTGCTAG
TATATCTTGGAATAAGCCGGAGTTAGATGGTTCTATCAAGTATAGAGTATTACTGAATGGTGAAACTATAGCAGAAAATA
TTACTAGCCAAAGTTATGTACTTACAAACTTAGATAAAGGTACTAGATACACTATAGAAGTGATTGCAAGTACATCAAAT
GCTTCTAGAGAAGATAGCATAACTTTTGAGACAATTGGTGCAGATGATCAAAACAATGATCAAAATAATGATCAAAATAA
TGATCAAAATAATAATGCTGGATCAACTGGTAACTGGAATGCAGAAGCAGTCTACAATAAGGGTGATAAAGTTATTGTTA
ATGGTGTGACTTATGAAGCTCAATGGTGGACACAAGGTAATAATCCGGCTGATGGTGGCGCATGGAAGAAACCTTTTGTT
TCAGGTGAGGCATGGAGTCAAGGTCAAGCATATACTGGCGGTCAAGTAGTTACATACCAAGGCGCTAAATATAAAGCTAA
ATGGTGGACTCAAGGAGATATTCCTTCAAATAGTAATGTTTGGGAAAAACAATAA

Upstream 100 bases:

>100_bases
TGACATTTTTCTTTTGCTTTAGCTTTAATTATGCTCATATAATCAAAATGTAAGCATTGTGCTTACATTTATTAATAGTT
GTAATAAGGAGAAATACTTT

Downstream 100 bases:

>100_bases
TAAAGTCTTATATAATCTAATTCTACTAAAATTTATCACTTCTTAAAAATCTTCTTTATAAGCGCATAATTTATGAAGAT
ACTTTATATATTTATCAAAT

Product: chitinase family 18 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MNKTKLVSVVCALMGLGSYSLLEAAPVNDVKTYDFKAPFKDYNNKIVLSINNVPSAKVVEFTSNFKPKTGWGSCFGTRAD
LVNFETTQLSNGEYLTKLSLKDSEGSLDLTQTCDIMGTDSGNALVLPGVVVPIVSSVKVDGKDLEIERPCADNVCENPTP
GYTNAAYYAQWAVWGRKYNPYDFKYDKLNTIIYAFIGFDKNTGNIKTLDASADSWGLSASARAAKKYPYLKSFLSFGGWT
NNGVTTAPMFEQLASNQQSMENFAKQSVELMRKLGFNGIDIDWEWWSDYGDDVAPAKKMLAFFKVLRAELDKASKADGKK
YYLAIAVNGARSRIEAMENPNNPNSVADFWKQTGKLMDEINIMNYDYQGGWGTGAPAWFQASAAFPNINFSPEVANSIGK
TGGWSVQGSVDAYIKAGVPAKKLIVGLPLYARSMTVASDTDGGLLQTITAPGFGDYEAGVFDYKCLINPVNDPVNGCGTA
KPISGLSDLVYYDISSNVDIFNKYGKVAMQPWAYSPSTKTFVTFDDVWSVNEKTKYAKSKNLGGTMFWQADGDSTDTNKS
LINAVAKVYASDTINVSVSDVTENSASISWNKPELDGSIKYRVLLNGETIAENITSQSYVLTNLDKGTRYTIEVIASTSN
ASREDSITFETIGADDQNNDQNNDQNNDQNNNAGSTGNWNAEAVYNKGDKVIVNGVTYEAQWWTQGNNPADGGAWKKPFV
SGEAWSQGQAYTGGQVVTYQGAKYKAKWWTQGDIPSNSNVWEKQ

Sequences:

>Translated_764_residues
MNKTKLVSVVCALMGLGSYSLLEAAPVNDVKTYDFKAPFKDYNNKIVLSINNVPSAKVVEFTSNFKPKTGWGSCFGTRAD
LVNFETTQLSNGEYLTKLSLKDSEGSLDLTQTCDIMGTDSGNALVLPGVVVPIVSSVKVDGKDLEIERPCADNVCENPTP
GYTNAAYYAQWAVWGRKYNPYDFKYDKLNTIIYAFIGFDKNTGNIKTLDASADSWGLSASARAAKKYPYLKSFLSFGGWT
NNGVTTAPMFEQLASNQQSMENFAKQSVELMRKLGFNGIDIDWEWWSDYGDDVAPAKKMLAFFKVLRAELDKASKADGKK
YYLAIAVNGARSRIEAMENPNNPNSVADFWKQTGKLMDEINIMNYDYQGGWGTGAPAWFQASAAFPNINFSPEVANSIGK
TGGWSVQGSVDAYIKAGVPAKKLIVGLPLYARSMTVASDTDGGLLQTITAPGFGDYEAGVFDYKCLINPVNDPVNGCGTA
KPISGLSDLVYYDISSNVDIFNKYGKVAMQPWAYSPSTKTFVTFDDVWSVNEKTKYAKSKNLGGTMFWQADGDSTDTNKS
LINAVAKVYASDTINVSVSDVTENSASISWNKPELDGSIKYRVLLNGETIAENITSQSYVLTNLDKGTRYTIEVIASTSN
ASREDSITFETIGADDQNNDQNNDQNNDQNNNAGSTGNWNAEAVYNKGDKVIVNGVTYEAQWWTQGNNPADGGAWKKPFV
SGEAWSQGQAYTGGQVVTYQGAKYKAKWWTQGDIPSNSNVWEKQ
>Mature_764_residues
MNKTKLVSVVCALMGLGSYSLLEAAPVNDVKTYDFKAPFKDYNNKIVLSINNVPSAKVVEFTSNFKPKTGWGSCFGTRAD
LVNFETTQLSNGEYLTKLSLKDSEGSLDLTQTCDIMGTDSGNALVLPGVVVPIVSSVKVDGKDLEIERPCADNVCENPTP
GYTNAAYYAQWAVWGRKYNPYDFKYDKLNTIIYAFIGFDKNTGNIKTLDASADSWGLSASARAAKKYPYLKSFLSFGGWT
NNGVTTAPMFEQLASNQQSMENFAKQSVELMRKLGFNGIDIDWEWWSDYGDDVAPAKKMLAFFKVLRAELDKASKADGKK
YYLAIAVNGARSRIEAMENPNNPNSVADFWKQTGKLMDEINIMNYDYQGGWGTGAPAWFQASAAFPNINFSPEVANSIGK
TGGWSVQGSVDAYIKAGVPAKKLIVGLPLYARSMTVASDTDGGLLQTITAPGFGDYEAGVFDYKCLINPVNDPVNGCGTA
KPISGLSDLVYYDISSNVDIFNKYGKVAMQPWAYSPSTKTFVTFDDVWSVNEKTKYAKSKNLGGTMFWQADGDSTDTNKS
LINAVAKVYASDTINVSVSDVTENSASISWNKPELDGSIKYRVLLNGETIAENITSQSYVLTNLDKGTRYTIEVIASTSN
ASREDSITFETIGADDQNNDQNNDQNNDQNNNAGSTGNWNAEAVYNKGDKVIVNGVTYEAQWWTQGNNPADGGAWKKPFV
SGEAWSQGQAYTGGQVVTYQGAKYKAKWWTQGDIPSNSNVWEKQ

Specific function: Bifunctional Enzyme With Lysozyme/Chitinase Activity. [C]

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 fibronectin type-III domains [H]

Homologues:

Organism=Homo sapiens, GI4502809, Length=398, Percent_Identity=24.3718592964824, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI144226251, Length=360, Percent_Identity=25.2777777777778, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI133893286, Length=401, Percent_Identity=23.9401496259352, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI42542398, Length=307, Percent_Identity=22.8013029315961, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17551250, Length=433, Percent_Identity=26.0969976905312, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71995504, Length=407, Percent_Identity=25.3071253071253, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17559362, Length=428, Percent_Identity=22.4299065420561, Blast_Score=79, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320579, Length=443, Percent_Identity=21.8961625282167, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI116007452, Length=420, Percent_Identity=25.2380952380952, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21358195, Length=446, Percent_Identity=23.3183856502242, Blast_Score=106, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24655584, Length=402, Percent_Identity=25.8706467661692, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI221330815, Length=386, Percent_Identity=26.4248704663212, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI161077700, Length=402, Percent_Identity=26.1194029850746, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI45550474, Length=403, Percent_Identity=26.5508684863524, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI221329807, Length=465, Percent_Identity=25.3763440860215, Blast_Score=97, Evalue=6e-20,
Organism=Drosophila melanogaster, GI28573679, Length=392, Percent_Identity=25.765306122449, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 83595; Mature: 83595

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50853 FN3 ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTKLVSVVCALMGLGSYSLLEAAPVNDVKTYDFKAPFKDYNNKIVLSINNVPSAKVVE
CCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCCHHCCCCEEEEEECCCCCCEEEE
FTSNFKPKTGWGSCFGTRADLVNFETTQLSNGEYLTKLSLKDSEGSLDLTQTCDIMGTDS
ECCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEEEEECCCCCEEHEEECEEEECCC
GNALVLPGVVVPIVSSVKVDGKDLEIERPCADNVCENPTPGYTNAAYYAQWAVWGRKYNP
CCEEEECCHHHHHHHHEEECCCCEEEECCCCCHHCCCCCCCCCCCHHEEEEEEECCCCCC
YDFKYDKLNTIIYAFIGFDKNTGNIKTLDASADSWGLSASARAAKKYPYLKSFLSFGGWT
CCCCHHHHCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC
NNGVTTAPMFEQLASNQQSMENFAKQSVELMRKLGFNGIDIDWEWWSDYGDDVAPAKKML
CCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHH
AFFKVLRAELDKASKADGKKYYLAIAVNGARSRIEAMENPNNPNSVADFWKQTGKLMDEI
HHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NIMNYDYQGGWGTGAPAWFQASAAFPNINFSPEVANSIGKTGGWSVQGSVDAYIKAGVPA
EEEEEECCCCCCCCCCHHEEECCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEECCCCH
KKLIVGLPLYARSMTVASDTDGGLLQTITAPGFGDYEAGVFDYKCLINPVNDPVNGCGTA
HHHEEECCHHHCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
KPISGLSDLVYYDISSNVDIFNKYGKVAMQPWAYSPSTKTFVTFDDVWSVNEKTKYAKSK
CCCCCCCEEEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCC
NLGGTMFWQADGDSTDTNKSLINAVAKVYASDTINVSVSDVTENSASISWNKPELDGSIK
CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCEE
YRVLLNGETIAENITSQSYVLTNLDKGTRYTIEVIASTSNASREDSITFETIGADDQNND
EEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCC
QNNDQNNDQNNNAGSTGNWNAEAVYNKGDKVIVNGVTYEAQWWTQGNNPADGGAWKKPFV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCC
SGEAWSQGQAYTGGQVVTYQGAKYKAKWWTQGDIPSNSNVWEKQ
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNKTKLVSVVCALMGLGSYSLLEAAPVNDVKTYDFKAPFKDYNNKIVLSINNVPSAKVVE
CCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCCHHCCCCEEEEEECCCCCCEEEE
FTSNFKPKTGWGSCFGTRADLVNFETTQLSNGEYLTKLSLKDSEGSLDLTQTCDIMGTDS
ECCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEEEEECCCCCEEHEEECEEEECCC
GNALVLPGVVVPIVSSVKVDGKDLEIERPCADNVCENPTPGYTNAAYYAQWAVWGRKYNP
CCEEEECCHHHHHHHHEEECCCCEEEECCCCCHHCCCCCCCCCCCHHEEEEEEECCCCCC
YDFKYDKLNTIIYAFIGFDKNTGNIKTLDASADSWGLSASARAAKKYPYLKSFLSFGGWT
CCCCHHHHCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHCCCC
NNGVTTAPMFEQLASNQQSMENFAKQSVELMRKLGFNGIDIDWEWWSDYGDDVAPAKKML
CCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHH
AFFKVLRAELDKASKADGKKYYLAIAVNGARSRIEAMENPNNPNSVADFWKQTGKLMDEI
HHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NIMNYDYQGGWGTGAPAWFQASAAFPNINFSPEVANSIGKTGGWSVQGSVDAYIKAGVPA
EEEEEECCCCCCCCCCHHEEECCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEECCCCH
KKLIVGLPLYARSMTVASDTDGGLLQTITAPGFGDYEAGVFDYKCLINPVNDPVNGCGTA
HHHEEECCHHHCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
KPISGLSDLVYYDISSNVDIFNKYGKVAMQPWAYSPSTKTFVTFDDVWSVNEKTKYAKSK
CCCCCCCEEEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCC
NLGGTMFWQADGDSTDTNKSLINAVAKVYASDTINVSVSDVTENSASISWNKPELDGSIK
CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCEE
YRVLLNGETIAENITSQSYVLTNLDKGTRYTIEVIASTSNASREDSITFETIGADDQNND
EEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCC
QNNDQNNDQNNNAGSTGNWNAEAVYNKGDKVIVNGVTYEAQWWTQGNNPADGGAWKKPFV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCC
SGEAWSQGQAYTGGQVVTYQGAKYKAKWWTQGDIPSNSNVWEKQ
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2203782; 8103047 [H]