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The map label for this gene is ygfF [H]

Identifier: 89256794

GI number: 89256794

Start: 1438513

End: 1438962

Strand: Reverse

Name: ygfF [H]

Synonym: FTL_1506

Alternate gene names: 89256794

Gene position: 1438962-1438513 (Counterclockwise)

Preceding gene: 89256795

Following gene: 89256792

Centisome position: 75.89

GC content: 34.67

Gene sequence:

>450_bases
ATGAGTATTAATCGTCTACAGAAAGTATTCCAAGTGAATGCTATAGGAAATATTCTATGTGCCAAACACGCAATAAAAAA
GATGTCCAGAAAATATGGATACCATGGTGGTAAAATTATTAATATATCCTCTAGTGCATCTCGCTCTGGCTCTCCTAATG
AATACATAGATTATGCTTGTACTAAAGGTGCTATTGATACTCTTACAAAAGGCTTATCAAAAGAACTTGCTGATGAAGGC
ATTCTTGTAAATTGTATAAGACCTGGATCTACATATACAGATATTCATAAACTATCAGGTGATGCTGATAGAGTTAATAA
AATAAAACACAAAATCCCACTAAAAAGAGGTGGTTACCCTGAAGAAATCGCCAGTGGAGTAATATGGCTACTATCTGATG
GTGCAAACTATTGCACTGGGACTTTTATAGATATCGCTGGTGGTAAATAA

Upstream 100 bases:

>100_bases
AAGAAGATGTTAGAGAAATGTTTAATGAATTTATTTCTTATCACGGTTCTATGTATGCCCTTATAAATAATGCAAGTACA
ATACCAGCCGTTTAGAAGAT

Downstream 100 bases:

>100_bases
AGTTAGGAATATTAATTTCACATAATAATACTTTATATGCCAAAGTTATGAGTTCTACCAATATACAACAACTGTTATTT
GTGCTATATGATACAAAGAT

Product: Short-chain dehydrogenase/reductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSINRLQKVFQVNAIGNILCAKHAIKKMSRKYGYHGGKIINISSSASRSGSPNEYIDYACTKGAIDTLTKGLSKELADEG
ILVNCIRPGSTYTDIHKLSGDADRVNKIKHKIPLKRGGYPEEIASGVIWLLSDGANYCTGTFIDIAGGK

Sequences:

>Translated_149_residues
MSINRLQKVFQVNAIGNILCAKHAIKKMSRKYGYHGGKIINISSSASRSGSPNEYIDYACTKGAIDTLTKGLSKELADEG
ILVNCIRPGSTYTDIHKLSGDADRVNKIKHKIPLKRGGYPEEIASGVIWLLSDGANYCTGTFIDIAGGK
>Mature_148_residues
SINRLQKVFQVNAIGNILCAKHAIKKMSRKYGYHGGKIINISSSASRSGSPNEYIDYACTKGAIDTLTKGLSKELADEGI
LVNCIRPGSTYTDIHKLSGDADRVNKIKHKIPLKRGGYPEEIASGVIWLLSDGANYCTGTFIDIAGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=142, Percent_Identity=33.0985915492958, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI59889578, Length=148, Percent_Identity=30.4054054054054, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI40254992, Length=139, Percent_Identity=30.9352517985612, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI19923817, Length=144, Percent_Identity=31.9444444444444, Blast_Score=67, Evalue=6e-12,
Organism=Homo sapiens, GI15277342, Length=148, Percent_Identity=32.4324324324324, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI7705925, Length=113, Percent_Identity=31.858407079646, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI2367175, Length=149, Percent_Identity=53.6912751677852, Blast_Score=181, Evalue=1e-47,
Organism=Escherichia coli, GI1788459, Length=148, Percent_Identity=37.1621621621622, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1789378, Length=150, Percent_Identity=30.6666666666667, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1787335, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1790717, Length=141, Percent_Identity=31.2056737588652, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI2367365, Length=145, Percent_Identity=29.6551724137931, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1789208, Length=130, Percent_Identity=32.3076923076923, Blast_Score=60, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=144, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=148, Percent_Identity=31.7567567567568, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=148, Percent_Identity=32.4324324324324, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=119, Percent_Identity=32.7731092436975, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=150, Percent_Identity=30.6666666666667, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24639444, Length=141, Percent_Identity=34.0425531914894, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355319, Length=143, Percent_Identity=36.3636363636364, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24644337, Length=118, Percent_Identity=32.2033898305085, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI23397609, Length=154, Percent_Identity=29.2207792207792, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28571526, Length=120, Percent_Identity=34.1666666666667, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644339, Length=118, Percent_Identity=33.8983050847458, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 16104; Mature: 15973

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINRLQKVFQVNAIGNILCAKHAIKKMSRKYGYHGGKIINISSSASRSGSPNEYIDYAC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHH
TKGAIDTLTKGLSKELADEGILVNCIRPGSTYTDIHKLSGDADRVNKIKHKIPLKRGGYP
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCH
EEIASGVIWLLSDGANYCTGTFIDIAGGK
HHHHCCEEEEEECCCCCCCCEEEECCCCC
>Mature Secondary Structure 
SINRLQKVFQVNAIGNILCAKHAIKKMSRKYGYHGGKIINISSSASRSGSPNEYIDYAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHH
TKGAIDTLTKGLSKELADEGILVNCIRPGSTYTDIHKLSGDADRVNKIKHKIPLKRGGYP
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCH
EEIASGVIWLLSDGANYCTGTFIDIAGGK
HHHHCCEEEEEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 7764507 [H]