Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is pgi [H]
Identifier: 89256765
GI number: 89256765
Start: 1400858
End: 1402480
Strand: Reverse
Name: pgi [H]
Synonym: FTL_1476
Alternate gene names: 89256765
Gene position: 1402480-1400858 (Counterclockwise)
Preceding gene: 89256766
Following gene: 89256764
Centisome position: 73.97
GC content: 32.59
Gene sequence:
>1623_bases ATGCTATTTTGTGATGATTCTAAAAAATATTTGAAAGAGCAAAATATAAACTTAAAAAATGAATTTGACAAAGATGATAA AAGAGTTGAGAAGTTCTCTCTAAAACATCAAAACATATATTTTGATTATTCAAAAAATCTTATTAATAATTATATTTTAA AGTCTCTTTTAGAGTCTGCAGAAAAATCTAGTCTTAAAGATAAAATTAAACAGATGTTTAATGGTGCTAAGATTAATTCT ACTGAACACAGAGCTGTTTTACATACGGCGTTGCGCGATTTGTCTAGTACGCCATTAATTGTTGATGGGCAAGATATTCG TCAAGAAGTAACAAAAGAAAAGCAGCGTGTAAAAGAGCTTGTTGAAAAAGTAGTATCTGGTCGATGGCGTGGATTCTCTG GTAAAAAGATTACTGATATTGTAAATATTGGTATTGGTGGCTCAGATCTTGGACCTAAAATGGTGGTTAGAGCATTACAA CCTTATCATTGTACAGATTTAAAAGTTCACTTTGTTTCAAATGTTGATGCTGACTCGCTATTACAAGCACTACATGTTGT TGATCCTGAAACTACTTTGTTTATCATAGCTTCAAAATCATTCTCAACTGAAGAGACTTTGTTAAATTCTATTTCAGCTA GAGAGTGGTTGTTAGATCATTATGAGGATGAAAAAGCTGTAGCTAACCATTTTGTTGCAATATCGAGTAAATTAGACAAA GTTAAAGAATTTGGTATAGATTTAGAGCATTGTTATAAAATGTGGGATTGGGTTGGCGGTCGCTATTCATTATGGTCATC AATTGGGATGTCGATAGCTTTTGCTATAGGTTATGATAATTTTGAGAAATTACTAGCTGGAGCGTACTCAGTTGATAAAT ATTTTAAAGAAACTGAATTTAGCAAAAATATTCCTGTGATTATGGCATTGCTGGCAAGTTATTATAGCTGTACGTATAAT AGTCAGTCACAAGCGTTACTTCCTTATGACGAGAGACTTTGTTATTTTGTTGATTATCTTCAGCAAGCAGATATGGAAAG TAATGGTAAATCAGTAAATATTGCTGGTGGAACTGTCAATTATCAAACTGGAGTTGTACTTTGGGGTGGTGTTGGTACTA ATGGTCAGCATGCTTTTCATCAACTTTTACATCAAGGTAATATTTTTATACCCGTTGATTTTATTGCTATTGCAACTAGT CATCATAATTATGATAACCATCAGCAGGCTTTACTTGCTAATTGTTTTGCACAGTCACAAGCACTAATGTTTGGACAATC ATATGATATGGTTTATAATGAGCTGTTAAAATCTGGTTTGAATGAAACTCAAGCAAAAAAGCTTGCGGCTCATAAGGTTA TACCAGGTAATAGACCAAGTACAACAATTTTACTTGATGAGCTAAGTCCATATAGTCTTGGTGCCTTGATTGCTTTGTAT GAGCATAAAATATTTGTTCAGGGTGTGTTATGGGACATCAATAGCTATGATCAGTGGGGTGTTGAGCTTGGCAAAAAACT TGGTAAAAATATATTAAAAGCTATGAATGATGATTCATCTGATGAGTATCAAAATTTAGATGATTCAACTAGACAGTTAA TAGCGAAGGTAAAAAATAAATAA
Upstream 100 bases:
>100_bases GGTGCAAGAAATTATGCTACAGAGGATAAGGTTGAGATATCTTATTCAAGTGGAGATATTTTGTTGTTTATATCACATAG AAAATATAAGGATAGATTAG
Downstream 100 bases:
>100_bases ATGATTATAAGTAAAAAGAAAGGCTTCTCTTTAGTTGAGACTATGGTTGTTATTGCTATCATGACAATACTTATGATGGC GGCAATTAGCTCGTTTACTT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MLFCDDSKKYLKEQNINLKNEFDKDDKRVEKFSLKHQNIYFDYSKNLINNYILKSLLESAEKSSLKDKIKQMFNGAKINS TEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQ PYHCTDLKVHFVSNVDADSLLQALHVVDPETTLFIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLDK VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKYFKETEFSKNIPVIMALLASYYSCTYN SQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGGTVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATS HHNYDNHQQALLANCFAQSQALMFGQSYDMVYNELLKSGLNETQAKKLAAHKVIPGNRPSTTILLDELSPYSLGALIALY EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDDSTRQLIAKVKNK
Sequences:
>Translated_540_residues MLFCDDSKKYLKEQNINLKNEFDKDDKRVEKFSLKHQNIYFDYSKNLINNYILKSLLESAEKSSLKDKIKQMFNGAKINS TEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQ PYHCTDLKVHFVSNVDADSLLQALHVVDPETTLFIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLDK VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKYFKETEFSKNIPVIMALLASYYSCTYN SQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGGTVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATS HHNYDNHQQALLANCFAQSQALMFGQSYDMVYNELLKSGLNETQAKKLAAHKVIPGNRPSTTILLDELSPYSLGALIALY EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDDSTRQLIAKVKNK >Mature_540_residues MLFCDDSKKYLKEQNINLKNEFDKDDKRVEKFSLKHQNIYFDYSKNLINNYILKSLLESAEKSSLKDKIKQMFNGAKINS TEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQ PYHCTDLKVHFVSNVDADSLLQALHVVDPETTLFIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLDK VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKYFKETEFSKNIPVIMALLASYYSCTYN SQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGGTVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATS HHNYDNHQQALLANCFAQSQALMFGQSYDMVYNELLKSGLNETQAKKLAAHKVIPGNRPSTTILLDELSPYSLGALIALY EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDDSTRQLIAKVKNK
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=531, Percent_Identity=48.5875706214689, Blast_Score=541, Evalue=1e-154, Organism=Homo sapiens, GI296080693, Length=531, Percent_Identity=45.0094161958569, Blast_Score=483, Evalue=1e-136, Organism=Escherichia coli, GI1790457, Length=532, Percent_Identity=49.6240601503759, Blast_Score=544, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71996708, Length=533, Percent_Identity=49.155722326454, Blast_Score=525, Evalue=1e-149, Organism=Caenorhabditis elegans, GI71996703, Length=533, Percent_Identity=49.155722326454, Blast_Score=525, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6319673, Length=533, Percent_Identity=47.2795497185741, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI24651916, Length=534, Percent_Identity=51.685393258427, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI24651914, Length=534, Percent_Identity=51.685393258427, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI17737445, Length=534, Percent_Identity=51.685393258427, Blast_Score=545, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 61105; Mature: 61105
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFCDDSKKYLKEQNINLKNEFDKDDKRVEKFSLKHQNIYFDYSKNLINNYILKSLLESA CEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH EKSSLKDKIKQMFNGAKINSTEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKEL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHH VEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYHCTDLKVHFVSNVDADSL HHHHHCCCCCCCCCCEEHHEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHH LQALHVVDPETTLFIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLDK HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKYFKETEF HHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC SKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGGTVN CCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEE YQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATSHHNYDNHQQALLANCFAQSQ ECCCEEEECCCCCCCHHHHHHHHHCCCEEEEEHHEEEEECCCCCCHHHHHHHHHHHHHHH ALMFGQSYDMVYNELLKSGLNETQAKKLAAHKVIPGNRPSTTILLDELSPYSLGALIALY HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHH EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDDSTRQLIAKVKNK HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MLFCDDSKKYLKEQNINLKNEFDKDDKRVEKFSLKHQNIYFDYSKNLINNYILKSLLESA CEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH EKSSLKDKIKQMFNGAKINSTEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKEL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHH VEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYHCTDLKVHFVSNVDADSL HHHHHCCCCCCCCCCEEHHEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHH LQALHVVDPETTLFIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKLDK HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VKEFGIDLEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKYFKETEF HHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC SKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGGTVN CCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEE YQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATSHHNYDNHQQALLANCFAQSQ ECCCEEEECCCCCCCHHHHHHHHHCCCEEEEEHHEEEEECCCCCCHHHHHHHHHHHHHHH ALMFGQSYDMVYNELLKSGLNETQAKKLAAHKVIPGNRPSTTILLDELSPYSLGALIALY HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHH EHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDDSTRQLIAKVKNK HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA