Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256732
Identifier: 89256732
GI number: 89256732
Start: 1367405
End: 1367968
Strand: Reverse
Name: 89256732
Synonym: FTL_1439
Alternate gene names: NA
Gene position: 1367968-1367405 (Counterclockwise)
Preceding gene: 89256733
Following gene: 89256731
Centisome position: 72.15
GC content: 34.4
Gene sequence:
>564_bases ATGGATTTTCTTCAAAGAGTATTTGGAAAAGATCATGGTGCTTTTGCATATTTGCATGGAATACTTACGGGTACAGATGG TTTCCCTTTTAAGCTTGATCCTGTAATAAATATTGATTATACAAAATTAGAGCCAACTAAAGTTTTTTCAAATGATGAGT TTACTGTTTGGGCTTTAGGTATCCCTAAAGGCGATGTTCCAACTTTGGCATATAAGATTGTGTCTAAGAAAGGCACTATC GTTGTAACTGGTGCTGGTGGTAGTAATGAACATGATAAATTTAGAGATGCATTTATTAAATTTGCAAAAAACGCAGATAT TCTAATGATGCCTATGCCAATTGACGAAAGTGCTGATGCGGCAGGTAGTTTCTTACATGCTAAACCATCGGTCATTGGAC AAGTTGCTGCAGCATTTAATCCTAAAGCATTAGTTTTAAGTCATTTCTTAGGCAAAGGTTTGGTACTTAAAGATGAATCA ACAAAAATAGTTAAAAAGTATTATAAAGGATCTGTTTATGAAGGTCGAGATTTAGCATGTTTCCCAGTTAATGGAGTTAG ATAG
Upstream 100 bases:
>100_bases CAGCAGATATTCCAGCGATATTAAAAGGAGCATATTTCTCCAAAAGACAGAGAATCTTCCGTTCTCAGTTCCTACACATT CAGGTCTTTTCCCAAGCGCG
Downstream 100 bases:
>100_bases GAGAATTTAATATGAAAAAAATACCTTTAATAATTTCTTTAACAGCTTCTATGTCGTTTGGTATTGCTTTAGCAGCAGAA GCTAAAGCTCCAGTTACACA
Product: arylsulfatase
Products: phenol; sulfate
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTKVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTI VVTGAGGSNEHDKFRDAFIKFAKNADILMMPMPIDESADAAGSFLHAKPSVIGQVAAAFNPKALVLSHFLGKGLVLKDES TKIVKKYYKGSVYEGRDLACFPVNGVR
Sequences:
>Translated_187_residues MDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTKVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTI VVTGAGGSNEHDKFRDAFIKFAKNADILMMPMPIDESADAAGSFLHAKPSVIGQVAAAFNPKALVLSHFLGKGLVLKDES TKIVKKYYKGSVYEGRDLACFPVNGVR >Mature_187_residues MDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTKVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTI VVTGAGGSNEHDKFRDAFIKFAKNADILMMPMPIDESADAAGSFLHAKPSVIGQVAAAFNPKALVLSHFLGKGLVLKDES TKIVKKYYKGSVYEGRDLACFPVNGVR
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.6.1
Molecular weight: Translated: 20373; Mature: 20373
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTKVFSNDEFTVWALG CCHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCEEEECCCCEEEEEEE IPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADILMMPMPIDESADA CCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC AGSFLHAKPSVIGQVAAAFNPKALVLSHFLGKGLVLKDESTKIVKKYYKGSVYEGRDLAC CCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEE FPVNGVR EECCCCC >Mature Secondary Structure MDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTKVFSNDEFTVWALG CCHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCEEEECCCCEEEEEEE IPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADILMMPMPIDESADA CCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC AGSFLHAKPSVIGQVAAAFNPKALVLSHFLGKGLVLKDESTKIVKKYYKGSVYEGRDLAC CCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEE FPVNGVR EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phenol sulfate; H2O
Specific reaction: A phenol sulfate + H2O = a phenol + sulfate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA