| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is yjeK [H]
Identifier: 89256661
GI number: 89256661
Start: 1295070
End: 1296056
Strand: Reverse
Name: yjeK [H]
Synonym: FTL_1362
Alternate gene names: 89256661
Gene position: 1296056-1295070 (Counterclockwise)
Preceding gene: 89256663
Following gene: 89256659
Centisome position: 68.36
GC content: 31.81
Gene sequence:
>987_bases ATGTCTACTAATGATTGGAAAAAAGTACTTAAAGAATCTTTCTCTTCACCTTTAGAATTATTAGAGTTTTTGGAAATAGA TAGTGAAGAAGCCAAAGTTTCATTAAATATAGCCAAGAAGTTTAAAATGATAGTGCCTAGATCATTTGCTGATAGAATGC AAAAAGGTAATATCAACGATCCTTTGCTCAAACAAGTTTTGCCAACTGCCGATGAGGAAGTGATAGATCAAGCCTATAGT AGCGATCCACTTGATGAAAAAAACTATAATAAAGTTCCTGGGTTACTACACAAATATCATGGTAGAGTTCTGCTGATAGC ACAAACAATCTGTGCGGTGCATTGTCGCTATTGTTTTCGTAAAGAGTTTGACTATAAAGAAAATATCCCCGGTAGAAAAG ATTGGTTGCAAGCCTTTGAATATATAGCAAATGACCAAAGTATTGAGGAAGTCATATTAAGTGGAGGAGATCCTCTCTTA AATAACGATGAAATATTAGAATTTTTTATAGAAAATATCCAGCGAATATCTCATATCAAAAGGCTTAGAATTCATTCAAG AATACCTGTAGTGCTACCAGAGCGAATGACTACTAAACTTTTGAAAATTCTTTCAGAGCATAGACTTGATACTGTATTAG TAATACATGTGAATCATCCAAATGAGCTAGATGGTAATGTTAGTAAAGTTTTAAAAGAAATACATAAACACGGCATAATT ATCCTAAATCAAAGTACATTACTTAAAGATATAAATGATGATGCTAATGTATTATATGCTTTGAGTACAAAACTTATAAA TGCAAAAGTAATTCCATACTATATACATTCACTAGATACTGTCTCAGGGACTAAACACTATAATGTTGATAATGATAAAG ATATTATGAAAAAGCTTTCAGAAATTTCATCAGGATTTATGGTGCCTGTGTTGACCAAAGAAATTCCAGGATATCCATCG AAGAAATGGCTATCTTTTCATAGCTAA
Upstream 100 bases:
>100_bases GATATATTTTCATTTAAAAAATTGACAATTTGATGCCATATGAGAGAATTGGCAGATATCAAAAAATCACCTAGCAATTA CAGCAAACTAATACAAATAT
Downstream 100 bases:
>100_bases TTGAAGAATAAAAATATGAATTTGTTTTCTTAAGAAAGACTGTCCCTACAGTTATATAAGGATAATTAGATTAGATAGAT TTTATATTAACAGCAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYS SDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLL NNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPS KKWLSFHS
Sequences:
>Translated_328_residues MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYS SDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLL NNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPS KKWLSFHS >Mature_327_residues STNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSS DPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLN NDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIII LNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSK KWLSFHS
Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]
COG id: COG1509
COG function: function code E; Lysine 2,3-aminomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KamA family [H]
Homologues:
Organism=Escherichia coli, GI1790589, Length=329, Percent_Identity=46.5045592705167, Blast_Score=315, Evalue=3e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003739 - InterPro: IPR022462 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 37742; Mature: 37611
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNIND CCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHCCCCCC PLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFR HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH KEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIK HCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII HHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEE ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLS EEECHHHHHHCCCCHHEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EISSGFMVPVLTKEIPGYPSKKWLSFHS HHHCCCEEEHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure STNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNIND CCHHHHHHHHHHHCCHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHCCCCCC PLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFR HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH KEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIK HCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII HHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEE ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLS EEECHHHHHHCCCCHHEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EISSGFMVPVLTKEIPGYPSKKWLSFHS HHHCCCEEEHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]