| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is isftu2
Identifier: 89256610
GI number: 89256610
Start: 1239087
End: 1239725
Strand: Direct
Name: isftu2
Synonym: FTL_1301
Alternate gene names: NA
Gene position: 1239087-1239725 (Clockwise)
Preceding gene: 89256607
Following gene: 89256611
Centisome position: 65.35
GC content: 29.58
Gene sequence:
>639_bases ATGTTACCATTTTATTATGGTAAATATAGATCAATACATAAGCGTTTTAAAGATTGGTGTGATAAAGATATATTTTCTAG ATTATTTAAATCAGTACAAAACCCTGATTTACAAGAAGTCATGCTTGATTCAACAATAGCAAGAGCACATGCTTGTGCTA CGGGATATGATAAAGATGATAACCAAGCAATTGGTAGATCAGTTGGTGGGATAACCACTAAAATCCATGCTATGACTGAT GCTTTAGGTAATCCAATAGAAATATTGTTGTCAGAAGGTAAAACTCATGATAGTAAAGTAGCTAATTTACTAAAAAATGT ATATAATACAAAAGTTATTGCTGATAGAGCATATCATTCTAATGAAATCAGGCAGCATATTCAAAGTATATCCTCTGAAG CTGTTATCCCTTGTAAATCAAATACTCTAAACCATATACCTTTTGATAGTCATGTATATAAAGAAAGACATTTGATAGAG AATTTCTTTTCTAAAATTAAGCATTTTAGAAGAGTATTCTCTAGATTTGATAAAACCATTTCAGCATATATAGGAATGAT TAAATTAGCTTGTACTTTTATTTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAAATATTCGTCGCATATCTTAA
Upstream 100 bases:
>100_bases TTTAAAATCATAAAAAGGTATACATACCAATGATGAAGCCAAATTAAGATTATTTATTGAAGCTGTATTTTATGTGTTAC GTACAGGCTGTCAATGGAGG
Downstream 100 bases:
>100_bases ATACAAACTTATCATCTAGATAAAATTATTATACAATTACAGCTGTTACAAATATACATATTAATTTTTTATAAAATGGC ACTAGAAAAATTTGAACTTG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLNIRRIS
Sequences:
>Translated_212_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLNIRRIS >Mature_212_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLNIRRIS
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 24563; Mature: 24563
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLNIRRIS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLNIRRIS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]