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The map label for this gene is 89256598

Identifier: 89256598

GI number: 89256598

Start: 1230409

End: 1230903

Strand: Reverse

Name: 89256598

Synonym: FTL_1289

Alternate gene names: NA

Gene position: 1230903-1230409 (Counterclockwise)

Preceding gene: 89256604

Following gene: 89256597

Centisome position: 64.92

GC content: 25.66

Gene sequence:

>495_bases
ATGTGTTTAACAAAATACTCTCGGATTAACTATAGTCCAAATGTCGCTAATATGTTGGCTCTATTATTGACTAATAAAAA
TTTGACTAATGGACGACATTTAGTCCAAGGTAGTTGTGTTAGTCAGATATTGTCATTCTATTGTAATAAAGAAATGTTTG
ATGAAGTCTATAAATATTCTAAAGAAAGAAATATAACTTTTACTTTATATGTTGATGATCTATCTTTTTCTAGTTCACAA
AATTTTGATGCTAAAGAAATAATAAAACAGGTAAATAAAATATTACATAGGAATGGGTATAAAGTTAAGAGTAGTAAAAC
TAAATACTCAAAGATAGGAAATATTACGGGAGTAATAGTAAAAAATACTAAGCTTTTAGTCAGAAATAGAACTCATGAAA
AGATTCATAGACTACAAAATAAAGATAGTAAAAAAGCTAAGCAAATAATAGGTCAAGCTAGATATATAGAGCCTACTTTT
TATACAAAAAAATAA

Upstream 100 bases:

>100_bases
TCTCCAGATTTAAATCCTATTGAAAAGGTTTGGGCTAACTTTAAAAAAATATTTAGAAAAGTGAATAATAGTTTTGAAAA
ATTTTGTGATGCTATCTCTT

Downstream 100 bases:

>100_bases
TCTTTTATTTTTTATGTAAGATGTTATATACCATCCACCCCTAGCTAAAATAGCAGGGTGTTAAAGCAAGCTAGTATATT
TTAATTTTTTTTAGCTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MCLTKYSRINYSPNVANMLALLLTNKNLTNGRHLVQGSCVSQILSFYCNKEMFDEVYKYSKERNITFTLYVDDLSFSSSQ
NFDAKEIIKQVNKILHRNGYKVKSSKTKYSKIGNITGVIVKNTKLLVRNRTHEKIHRLQNKDSKKAKQIIGQARYIEPTF
YTKK

Sequences:

>Translated_164_residues
MCLTKYSRINYSPNVANMLALLLTNKNLTNGRHLVQGSCVSQILSFYCNKEMFDEVYKYSKERNITFTLYVDDLSFSSSQ
NFDAKEIIKQVNKILHRNGYKVKSSKTKYSKIGNITGVIVKNTKLLVRNRTHEKIHRLQNKDSKKAKQIIGQARYIEPTF
YTKK
>Mature_164_residues
MCLTKYSRINYSPNVANMLALLLTNKNLTNGRHLVQGSCVSQILSFYCNKEMFDEVYKYSKERNITFTLYVDDLSFSSSQ
NFDAKEIIKQVNKILHRNGYKVKSSKTKYSKIGNITGVIVKNTKLLVRNRTHEKIHRLQNKDSKKAKQIIGQARYIEPTF
YTKK

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19082; Mature: 19082

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLTKYSRINYSPNVANMLALLLTNKNLTNGRHLVQGSCVSQILSFYCNKEMFDEVYKYS
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
KERNITFTLYVDDLSFSSSQNFDAKEIIKQVNKILHRNGYKVKSSKTKYSKIGNITGVIV
CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCEEEEEE
KNTKLLVRNRTHEKIHRLQNKDSKKAKQIIGQARYIEPTFYTKK
ECCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MCLTKYSRINYSPNVANMLALLLTNKNLTNGRHLVQGSCVSQILSFYCNKEMFDEVYKYS
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
KERNITFTLYVDDLSFSSSQNFDAKEIIKQVNKILHRNGYKVKSSKTKYSKIGNITGVIV
CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCEEEEEE
KNTKLLVRNRTHEKIHRLQNKDSKKAKQIIGQARYIEPTFYTKK
ECCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA