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The map label for this gene is ycfX [C]

Identifier: 89256586

GI number: 89256586

Start: 1217250

End: 1218134

Strand: Reverse

Name: ycfX [C]

Synonym: FTL_1277

Alternate gene names: 89256586

Gene position: 1218134-1217250 (Counterclockwise)

Preceding gene: 89256587

Following gene: 89256585

Centisome position: 64.25

GC content: 33.22

Gene sequence:

>885_bases
ATGAGTAAAGAAATTCAAATTAAGAATAGAACTGTGGTTGGTGTTGATATCGGTGGCACTAAAGTGAATGCTGGTAGGGT
ATGTGGAGAAAATCTATTAGACTCTTACTTGAGCAAAATTCCACCAGATGCAGAACATAATGCTCAATCTGTTATTGATG
TTGTCATAAATACTATAGCAAAAGTTTTCACCTCTGAAGTAGAAGGTATTGGCGTTGGGATTTCTAGTGTTGCAGATCGA
GAAAAGGGAATTGTATATGATGTGCAAAATATCAAATCATGGCAAGATATTCATCTAAAGGAAATACTAGAGGCAGAATT
TAAAGTACCAGTTTTTATAGATAATGATGCAAACTGTTTTGCTATTGGACAAAGACTATATGGTAAAGGCAAACAATATG
AAAATTTTGTTGGTATTACAATAGGTACTGGTATTGGTGGAGGAATTATAAATAAAGGCTCCTTACTAAAAGACTCTAAT
TGCGGTGCTGGAGAATTTGGCATGTTGCCATATCTAGATGGAATTTTAGAAGATTATTGTAGTGGTCAATTTTTTATAAA
AAAGATTGGTGTTGAAGGTGTTGAGATTCTCAAGCGTGCAAGAAATAATGATAAAGATGCTATAAATATCTATAAACAAT
TTGGTAAACATCTTGGAGTAGCAATAAAGTCTATTATGTATACTCTAGACCCAGAAGTGATAATAATCGCATGGTCAATA
ATATCAGCCAGAGAGTTTTTTGAAAAAGCAATGTGGGATGAGATTAAAACATTTGCCTTTACTCAATCAGCTAAAAAAAT
TAAAATAGAATGGTCAGAAACGGAGGGAGATTTTCAGGTTTTTAGCGCTGCAGCTGTTTATTTGGATAGAAGTAGCAATT
TATAA

Upstream 100 bases:

>100_bases
ACTATAGTATATATTTTATATGTAGCTATAACAGCTAAGCCATTAATTGATAATAAAACTATAAAGCTGACAGAATTATT
TAAAAATAAGTTGAAGTGAT

Downstream 100 bases:

>100_bases
TTTTTTAATAGAGTAATGTTAAATGAATAAAACTCAGCTACAAATATTAACCTTTTTAGATGATGAAAAATATGTAATTG
GTGAGGATATTGCTCAAAAA

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSKEIQIKNRTVVGVDIGGTKVNAGRVCGENLLDSYLSKIPPDAEHNAQSVIDVVINTIAKVFTSEVEGIGVGISSVADR
EKGIVYDVQNIKSWQDIHLKEILEAEFKVPVFIDNDANCFAIGQRLYGKGKQYENFVGITIGTGIGGGIINKGSLLKDSN
CGAGEFGMLPYLDGILEDYCSGQFFIKKIGVEGVEILKRARNNDKDAINIYKQFGKHLGVAIKSIMYTLDPEVIIIAWSI
ISAREFFEKAMWDEIKTFAFTQSAKKIKIEWSETEGDFQVFSAAAVYLDRSSNL

Sequences:

>Translated_294_residues
MSKEIQIKNRTVVGVDIGGTKVNAGRVCGENLLDSYLSKIPPDAEHNAQSVIDVVINTIAKVFTSEVEGIGVGISSVADR
EKGIVYDVQNIKSWQDIHLKEILEAEFKVPVFIDNDANCFAIGQRLYGKGKQYENFVGITIGTGIGGGIINKGSLLKDSN
CGAGEFGMLPYLDGILEDYCSGQFFIKKIGVEGVEILKRARNNDKDAINIYKQFGKHLGVAIKSIMYTLDPEVIIIAWSI
ISAREFFEKAMWDEIKTFAFTQSAKKIKIEWSETEGDFQVFSAAAVYLDRSSNL
>Mature_293_residues
SKEIQIKNRTVVGVDIGGTKVNAGRVCGENLLDSYLSKIPPDAEHNAQSVIDVVINTIAKVFTSEVEGIGVGISSVADRE
KGIVYDVQNIKSWQDIHLKEILEAEFKVPVFIDNDANCFAIGQRLYGKGKQYENFVGITIGTGIGGGIINKGSLLKDSNC
GAGEFGMLPYLDGILEDYCSGQFFIKKIGVEGVEILKRARNNDKDAINIYKQFGKHLGVAIKSIMYTLDPEVIIIAWSII
SAREFFEKAMWDEIKTFAFTQSAKKIKIEWSETEGDFQVFSAAAVYLDRSSNL

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566325, Length=270, Percent_Identity=27.4074074074074, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI298566315, Length=271, Percent_Identity=28.0442804428044, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4885285, Length=271, Percent_Identity=28.0442804428044, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI190014632, Length=271, Percent_Identity=28.0442804428044, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1787363, Length=253, Percent_Identity=27.6679841897233, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081733, Length=276, Percent_Identity=24.2753623188406, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786891, Length=279, Percent_Identity=22.9390681003584, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32409; Mature: 32278

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEIQIKNRTVVGVDIGGTKVNAGRVCGENLLDSYLSKIPPDAEHNAQSVIDVVINTIA
CCCCEEECCCEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KVFTSEVEGIGVGISSVADREKGIVYDVQNIKSWQDIHLKEILEAEFKVPVFIDNDANCF
HHHHHHHCCCCCCHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEE
AIGQRLYGKGKQYENFVGITIGTGIGGGIINKGSLLKDSNCGAGEFGMLPYLDGILEDYC
EECHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH
SGQFFIKKIGVEGVEILKRARNNDKDAINIYKQFGKHLGVAIKSIMYTLDPEVIIIAWSI
CCEEEEEHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
ISAREFFEKAMWDEIKTFAFTQSAKKIKIEWSETEGDFQVFSAAAVYLDRSSNL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
SKEIQIKNRTVVGVDIGGTKVNAGRVCGENLLDSYLSKIPPDAEHNAQSVIDVVINTIA
CCCEEECCCEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KVFTSEVEGIGVGISSVADREKGIVYDVQNIKSWQDIHLKEILEAEFKVPVFIDNDANCF
HHHHHHHCCCCCCHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEE
AIGQRLYGKGKQYENFVGITIGTGIGGGIINKGSLLKDSNCGAGEFGMLPYLDGILEDYC
EECHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH
SGQFFIKKIGVEGVEILKRARNNDKDAINIYKQFGKHLGVAIKSIMYTLDPEVIIIAWSI
CCEEEEEHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
ISAREFFEKAMWDEIKTFAFTQSAKKIKIEWSETEGDFQVFSAAAVYLDRSSNL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]