| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is tas [H]
Identifier: 89256572
GI number: 89256572
Start: 1201268
End: 1202272
Strand: Direct
Name: tas [H]
Synonym: FTL_1258
Alternate gene names: 89256572
Gene position: 1201268-1202272 (Clockwise)
Preceding gene: 89256571
Following gene: 89256576
Centisome position: 63.36
GC content: 36.12
Gene sequence:
>1005_bases ATGACATGGGGACGTCAAAATACTCAAGCTGAAGGTTTTGAACAAATGGATTATGCTCTTGCTCAAGGTATCAACTTTGG GGATACAGCAGAAATGTATGCGATTCCCCCTACTGCTAAGACTTATGGTAAAACTGAAGAGATAATCGGTAACTGGTTTA AAACAAGGCAAAAACGTAGTGATGTTATGTTAGCAACTAAATTCTCGCCGATGACATGGGCTAGAAATGAACAAAACCCT ATCACAAATAAGGTAAATATTATCGATGCCGTAGATAATAGTCTAAAACGCCTAAAGACTGATTATATCGATTTATACCA ATTCCACTGGCCAACAAATAGACCTCACTATCATTTTGGTAATTGGTGGGATTTTGAACCTCTAGTAGGGCAACAAAATA AACAACGTATAGTTGATAATATCCATGAAATTCTAGTTACTTGCGATGAGTTAGTTAAGGCTGGAAAGATTAGACACATA GGTCTGTCAAATGACTCTGCATGGGGAATTAATCAATTTATCAAACTTGCAGAAAAACATAAACTACCACGTCTAGCAAG TATTCAGCATGAATATAATCTTAATCGTCGTAGAGACGAAACAGATATTATGGAGACTTGTGCTCTTGAAGAAATATCAT ATCTTGCATGGTCACCACTTGAGCAAGGAGTGCTAACAGGCAAATATCGTAATGGTGCTCGCCCTGCTGGCACTAGAATG TCTGCTGAAATTCTAGATGGCCAAGAAGATCGCTATGCTTTTAGATTTGCTACCAACGATGATGCTGTGACAGCGTATAT TAATATTGCAAAAAAACATAACCTTGATATTTGTCAAATGGCTATCGCTTTTACGATTAGAAAAGCATATATGAGTTGTA GTATAATTGGTGCTACATCTATGGAGCAGCTAAAAACAAATATTGAAGCGATTAATTTAAACCTATATGATGAGGTTTTA GCTGATATTGAAAAAGTTAGAAGAAAATATCCAATACCGTTTTAA
Upstream 100 bases:
>100_bases TAATTTTAACTGTTATATTCAGTTATTTGCTATAATCTTGTTATATTAATTTTTTAGAAGTAATTATGAAATATACTAAA TTAGGTAAAACCTTGGTACG
Downstream 100 bases:
>100_bases CAATAGATTTAAAACATTGTCGAAAAAAATCCTTCTAATCTTAATATGGTTAAGTGCAGTAGCATTTTATATGTATACTC GTATGATAAATACTTCACTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTWGRQNTQAEGFEQMDYALAQGINFGDTAEMYAIPPTAKTYGKTEEIIGNWFKTRQKRSDVMLATKFSPMTWARNEQNP ITNKVNIIDAVDNSLKRLKTDYIDLYQFHWPTNRPHYHFGNWWDFEPLVGQQNKQRIVDNIHEILVTCDELVKAGKIRHI GLSNDSAWGINQFIKLAEKHKLPRLASIQHEYNLNRRRDETDIMETCALEEISYLAWSPLEQGVLTGKYRNGARPAGTRM SAEILDGQEDRYAFRFATNDDAVTAYINIAKKHNLDICQMAIAFTIRKAYMSCSIIGATSMEQLKTNIEAINLNLYDEVL ADIEKVRRKYPIPF
Sequences:
>Translated_334_residues MTWGRQNTQAEGFEQMDYALAQGINFGDTAEMYAIPPTAKTYGKTEEIIGNWFKTRQKRSDVMLATKFSPMTWARNEQNP ITNKVNIIDAVDNSLKRLKTDYIDLYQFHWPTNRPHYHFGNWWDFEPLVGQQNKQRIVDNIHEILVTCDELVKAGKIRHI GLSNDSAWGINQFIKLAEKHKLPRLASIQHEYNLNRRRDETDIMETCALEEISYLAWSPLEQGVLTGKYRNGARPAGTRM SAEILDGQEDRYAFRFATNDDAVTAYINIAKKHNLDICQMAIAFTIRKAYMSCSIIGATSMEQLKTNIEAINLNLYDEVL ADIEKVRRKYPIPF >Mature_333_residues TWGRQNTQAEGFEQMDYALAQGINFGDTAEMYAIPPTAKTYGKTEEIIGNWFKTRQKRSDVMLATKFSPMTWARNEQNPI TNKVNIIDAVDNSLKRLKTDYIDLYQFHWPTNRPHYHFGNWWDFEPLVGQQNKQRIVDNIHEILVTCDELVKAGKIRHIG LSNDSAWGINQFIKLAEKHKLPRLASIQHEYNLNRRRDETDIMETCALEEISYLAWSPLEQGVLTGKYRNGARPAGTRMS AEILDGQEDRYAFRFATNDDAVTAYINIAKKHNLDICQMAIAFTIRKAYMSCSIIGATSMEQLKTNIEAINLNLYDEVLA DIEKVRRKYPIPF
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436962, Length=337, Percent_Identity=24.9258160237389, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI27436964, Length=337, Percent_Identity=24.9258160237389, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436966, Length=337, Percent_Identity=24.9258160237389, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436969, Length=336, Percent_Identity=25.297619047619, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4504825, Length=336, Percent_Identity=25.297619047619, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1789199, Length=342, Percent_Identity=42.6900584795322, Blast_Score=267, Evalue=8e-73, Organism=Escherichia coli, GI87081735, Length=317, Percent_Identity=28.7066246056782, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1788070, Length=307, Percent_Identity=28.3387622149837, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1789375, Length=309, Percent_Identity=25.5663430420712, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788081, Length=323, Percent_Identity=26.625386996904, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323998, Length=331, Percent_Identity=23.8670694864048, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319958, Length=335, Percent_Identity=23.8805970149254, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=334, Percent_Identity=23.6526946107784, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6322615, Length=291, Percent_Identity=22.680412371134, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38566; Mature: 38435
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWGRQNTQAEGFEQMDYALAQGINFGDTAEMYAIPPTAKTYGKTEEIIGNWFKTRQKRS CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHC DVMLATKFSPMTWARNEQNPITNKVNIIDAVDNSLKRLKTDYIDLYQFHWPTNRPHYHFG CEEEEEECCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC NWWDFEPLVGQQNKQRIVDNIHEILVTCDELVKAGKIRHIGLSNDSAWGINQFIKLAEKH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH KLPRLASIQHEYNLNRRRDETDIMETCALEEISYLAWSPLEQGVLTGKYRNGARPAGTRM CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCCCCCCCC SAEILDGQEDRYAFRFATNDDAVTAYINIAKKHNLDICQMAIAFTIRKAYMSCSIIGATS CHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHEEEECCCC MEQLKTNIEAINLNLYDEVLADIEKVRRKYPIPF HHHHHHCHHEEEECHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TWGRQNTQAEGFEQMDYALAQGINFGDTAEMYAIPPTAKTYGKTEEIIGNWFKTRQKRS CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHC DVMLATKFSPMTWARNEQNPITNKVNIIDAVDNSLKRLKTDYIDLYQFHWPTNRPHYHFG CEEEEEECCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC NWWDFEPLVGQQNKQRIVDNIHEILVTCDELVKAGKIRHIGLSNDSAWGINQFIKLAEKH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH KLPRLASIQHEYNLNRRRDETDIMETCALEEISYLAWSPLEQGVLTGKYRNGARPAGTRM CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCCCCCCCC SAEILDGQEDRYAFRFATNDDAVTAYINIAKKHNLDICQMAIAFTIRKAYMSCSIIGATS CHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHEEEECCCC MEQLKTNIEAINLNLYDEVLADIEKVRRKYPIPF HHHHHHCHHEEEECHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]