| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is ybjQ [C]
Identifier: 89256567
GI number: 89256567
Start: 1193945
End: 1194265
Strand: Direct
Name: ybjQ [C]
Synonym: FTL_1249
Alternate gene names: 89256567
Gene position: 1193945-1194265 (Clockwise)
Preceding gene: 89256566
Following gene: 89256568
Centisome position: 62.97
GC content: 33.64
Gene sequence:
>321_bases ATGATATTAACTACAGCAGATACTCTTGGTAAAAGAGAAATTATAGAATACAAAGGTCTAGTTACAGGAATAATTGTAAG AACACCAACTATAACTCAAGGTATCTTGGGAGGCTTAAAAAATATAATAGGTGGTAAAAATACTTCCTATACCAATGTCT GTAAAGAAGCTAGATTGCATGCTGAACAAGAAATGATAAATCAAGCCAAAGAATTAGGTGCTAATGCTATAGTTGCTATT CGTTATGATTCAAGCAGTCTTGGAGGTAATACTAGTGGTACTGAAGTTTTTTGCTATGGTACTGCTGTCGTTGTAAGGTA A
Upstream 100 bases:
>100_bases GCTATCAATATGGGTGCTACTAAGCGTGACTTTGATGATACCATAGCTATCCACCCTACTAGTTCTGAAGAGCTTGTGAC TTTAGTTTAAGGAATATCCT
Downstream 100 bases:
>100_bases TTATGTTCTGTGCACAAAAAACTTAAATTATATTGAAAATAGCTAAACTGCTGTTATTTAAGATTTGAAAAGCAATAAAT ATCAATGGTTTAGCAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MILTTADTLGKREIIEYKGLVTGIIVRTPTITQGILGGLKNIIGGKNTSYTNVCKEARLHAEQEMINQAKELGANAIVAI RYDSSSLGGNTSGTEVFCYGTAVVVR
Sequences:
>Translated_106_residues MILTTADTLGKREIIEYKGLVTGIIVRTPTITQGILGGLKNIIGGKNTSYTNVCKEARLHAEQEMINQAKELGANAIVAI RYDSSSLGGNTSGTEVFCYGTAVVVR >Mature_106_residues MILTTADTLGKREIIEYKGLVTGIIVRTPTITQGILGGLKNIIGGKNTSYTNVCKEARLHAEQEMINQAKELGANAIVAI RYDSSSLGGNTSGTEVFCYGTAVVVR
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=106, Percent_Identity=36.7924528301887, Blast_Score=66, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1226_FRATO (Q0BLF0)
Other databases:
- EMBL: CP000437 - RefSeq: YP_763721.1 - ProteinModelPortal: Q0BLF0 - SMR: Q0BLF0 - STRING: Q0BLF0 - GeneID: 4306874 - GenomeReviews: CP000437_GR - KEGG: fth:FTH_1226 - eggNOG: COG0393 - HOGENOM: HBG339160 - OMA: SSIAQGA - ProtClustDB: CLSK929505 - BioCyc: FTUL393011:FTH_1226-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11289; Mature: 11289
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTTADTLGKREIIEYKGLVTGIIVRTPTITQGILGGLKNIIGGKNTSYTNVCKEARLH CEEECCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AEQEMINQAKELGANAIVAIRYDSSSLGGNTSGTEVFCYGTAVVVR HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MILTTADTLGKREIIEYKGLVTGIIVRTPTITQGILGGLKNIIGGKNTSYTNVCKEARLH CEEECCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AEQEMINQAKELGANAIVAIRYDSSSLGGNTSGTEVFCYGTAVVVR HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA