Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256561
Identifier: 89256561
GI number: 89256561
Start: 1189178
End: 1189510
Strand: Reverse
Name: 89256561
Synonym: FTL_1243
Alternate gene names: NA
Gene position: 1189510-1189178 (Counterclockwise)
Preceding gene: 89256570
Following gene: 89256560
Centisome position: 62.74
GC content: 33.93
Gene sequence:
>333_bases ATGCAAACTAGTATGCATGCTTCAGAATTACAGGGCAATGCTGTGATGATCGAGCTTTTGGAATATTTCAAAAAGTATCA ACCGAAAGGCGATGTTTATCTAATCCCTCAATGTAACCCTATCGGTAAAGATGTATTTATAGGAGCAGGGCATCAGGGTA GATTTGACTCAGCAACAGGAGATAACTTCAATAGATATTACTTCTATCCTAAAATTGACTATTCAGCATTTGTTAAAGAA CATATTAATTCAACTACAGCAGAGTATAAGCAAGCTTTTGAAAATCTTTTACAACAAGAATTAGATAAAGAACTATCTAA TGAATGGGAGTAA
Upstream 100 bases:
>100_bases ACTATATTTCCAAACAAAAAATCAAAGTAAGTCAATCATCAACAGGTGAAGATATTCATGTAGAGAAAATAAATATTAAA GGTTTTGACTCATCAGCACC
Downstream 100 bases:
>100_bases TCGGAGCAATATGTCATGGTGTAGCAGCATTGATAAATGTTAAAGATAATAATGGCCAAAATATCATAAGAGATAAAGAA GTAACTGGCTTTAGTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MQTSMHASELQGNAVMIELLEYFKKYQPKGDVYLIPQCNPIGKDVFIGAGHQGRFDSATGDNFNRYYFYPKIDYSAFVKE HINSTTAEYKQAFENLLQQELDKELSNEWE
Sequences:
>Translated_110_residues MQTSMHASELQGNAVMIELLEYFKKYQPKGDVYLIPQCNPIGKDVFIGAGHQGRFDSATGDNFNRYYFYPKIDYSAFVKE HINSTTAEYKQAFENLLQQELDKELSNEWE >Mature_110_residues MQTSMHASELQGNAVMIELLEYFKKYQPKGDVYLIPQCNPIGKDVFIGAGHQGRFDSATGDNFNRYYFYPKIDYSAFVKE HINSTTAEYKQAFENLLQQELDKELSNEWE
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12784; Mature: 12784
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSMHASELQGNAVMIELLEYFKKYQPKGDVYLIPQCNPIGKDVFIGAGHQGRFDSATG CCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCC DNFNRYYFYPKIDYSAFVKEHINSTTAEYKQAFENLLQQELDKELSNEWE CCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTSMHASELQGNAVMIELLEYFKKYQPKGDVYLIPQCNPIGKDVFIGAGHQGRFDSATG CCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCC DNFNRYYFYPKIDYSAFVKEHINSTTAEYKQAFENLLQQELDKELSNEWE CCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA