Click here to switch to the map view.

The map label for this gene is 89256560

Identifier: 89256560

GI number: 89256560

Start: 1188954

End: 1189187

Strand: Reverse

Name: 89256560

Synonym: FTL_1242

Alternate gene names: NA

Gene position: 1189187-1188954 (Counterclockwise)

Preceding gene: 89256561

Following gene: 89256554

Centisome position: 62.72

GC content: 30.77

Gene sequence:

>234_bases
ATGGGAGTAATCGGAGCAATATGTCATGGTGTAGCAGCATTGATAAATGTTAAAGATAATAATGGCCAAAATATCATAAG
AGATAAAGAAGTAACTGGCTTTAGTAATAATGAAGAAAAAATTGTTGGTTTAACCAATGTTGTGCCTTTTTCTCTAGAAG
ATAGTTTAGTCGAAGCTGGTGCTAAATATAGTATAGTTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAG

Upstream 100 bases:

>100_bases
CAGCATTTGTTAAAGAACATATTAATTCAACTACAGCAGAGTATAAGCAAGCTTTTGAAAATCTTTTACAACAAGAATTA
GATAAAGAACTATCTAATGA

Downstream 100 bases:

>100_bases
AAATGTTATAATGTCTAATAAAAATGCCATCATATAGCCAAGATTTTAGAGACATCGTAATTAATAAATATGAAGAAGGT
ATGACGGAGTTCGAGCTGAG

Product: ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; C56 Family Peptidase; ThiJ/PfpI; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; NonF-Related Protein; DJ-1/PfpI Family Protein

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGVIGAICHGVAALINVKDNNGQNIIRDKEVTGFSNNEEKIVGLTNVVPFSLEDSLVEAGAKYSIVNPKDICRKRYL

Sequences:

>Translated_77_residues
MGVIGAICHGVAALINVKDNNGQNIIRDKEVTGFSNNEEKIVGLTNVVPFSLEDSLVEAGAKYSIVNPKDICRKRYL
>Mature_76_residues
GVIGAICHGVAALINVKDNNGQNIIRDKEVTGFSNNEEKIVGLTNVVPFSLEDSLVEAGAKYSIVNPKDICRKRYL

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8361; Mature: 8230

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVIGAICHGVAALINVKDNNGQNIIRDKEVTGFSNNEEKIVGLTNVVPFSLEDSLVEAG
CCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCC
AKYSIVNPKDICRKRYL
CCEEECCHHHHHHHCCC
>Mature Secondary Structure 
GVIGAICHGVAALINVKDNNGQNIIRDKEVTGFSNNEEKIVGLTNVVPFSLEDSLVEAG
CHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCC
AKYSIVNPKDICRKRYL
CCEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA