| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256555
Identifier: 89256555
GI number: 89256555
Start: 1184159
End: 1184998
Strand: Direct
Name: 89256555
Synonym: FTL_1237
Alternate gene names: NA
Gene position: 1184159-1184998 (Clockwise)
Preceding gene: 89256553
Following gene: 89256556
Centisome position: 62.46
GC content: 34.64
Gene sequence:
>840_bases ATGGAAAAGTACCTATTCTTTGAATTAATAATTTTTATAGTTGCAGTTTTAGGTGGTGGTATTGGTGCTGTTATTGGTTT AGGTGGTGGTTTAGTAATTACCCCATTACTGACAACAGTGCTTGGGGTACCTCTTCATTACGCAATAGGAGCCTCACTGG TAGCTATTATCTGTACATCTACTGCAACATCTTTAGTTTCACTACAGTCACATGGATTAACCAAAGAAAAATTAGGTTTA TTTTTAGCATTAGCAACAGCTGTAGGAGCTATATTTGGAGCTAAGCTAGCTGTGATGCTTAGAGCTAAAGTGTTATTTTT AATTTTTAGCGGCATACTTATTGTAGTTGCAATTTTAAGTTTTATTAAAAAAAAATCAAATGCTGAAACTAAACCACCAA AACAGTCTTTTATAGCTAATAAATTACAGCTTAATGATAGTGTTGTTATAGCTGGGCAAAAGCAAGATTATAATGTCAAT CACCCTATCATTGGTTTTATCTTTATGGCTGGTGCTGGTTTTATTGGTGGCTTACTTGGTATTGGTGCGGGAATATTTAA AGTTGTAGCTATGGATAAAATTATGAAAATTCCATTTAGGGTCAGTGCCTCTACAAGTAACTTCATTATGGGTGTTACTG CATTTGCTGCGACTTCAACTTATTACTTTGCTGGATATATAGATAGCTCTATTACAGCGGCTGTAGCATTAGGTACTTTA TTGGGTGCGACCATTGGCTCAAAATTAATGCCGCATATCCCAACCAAGGCTCTTAGATTAATGTTTTTTATAGTTGTATT TATATCAGCTATACAAATGATTATTAAGGGGCTAGTATGA
Upstream 100 bases:
>100_bases ATTTTAAAAGCATTTAAGTAAAAACACAAATTTTTTGAATAAAATAGTTGCTAAAAAGGTTATAATCTCGATATTAGAAC TCTGTATTCAAAAATTTAGC
Downstream 100 bases:
>100_bases TTAAAGAAAATGTTATTTATAAAAGCTTAAAGTTAAATCTATTTGTAGCAATATTATTTATAATTATTGGTGCACTTAAT GCTTTTACAGGAAATTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLHYAIGASLVAIICTSTATSLVSLQSHGLTKEKLGL FLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVN HPIIGFIFMAGAGFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTL LGATIGSKLMPHIPTKALRLMFFIVVFISAIQMIIKGLV
Sequences:
>Translated_279_residues MEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLHYAIGASLVAIICTSTATSLVSLQSHGLTKEKLGL FLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVN HPIIGFIFMAGAGFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTL LGATIGSKLMPHIPTKALRLMFFIVVFISAIQMIIKGLV >Mature_279_residues MEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLHYAIGASLVAIICTSTATSLVSLQSHGLTKEKLGL FLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVN HPIIGFIFMAGAGFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTL LGATIGSKLMPHIPTKALRLMFFIVVFISAIQMIIKGLV
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29216; Mature: 29216
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLHYAIGASLVAIICTS CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVAILS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFIFMAGAGFIGGLLG HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH IGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTL HHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH LGATIGSKLMPHIPTKALRLMFFIVVFISAIQMIIKGLV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLHYAIGASLVAIICTS CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVAILS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFIFMAGAGFIGGLLG HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH IGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTL HHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH LGATIGSKLMPHIPTKALRLMFFIVVFISAIQMIIKGLV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA