| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256542
Identifier: 89256542
GI number: 89256542
Start: 1172718
End: 1173323
Strand: Direct
Name: 89256542
Synonym: FTL_1221
Alternate gene names: NA
Gene position: 1172718-1173323 (Clockwise)
Preceding gene: 89256541
Following gene: 89256543
Centisome position: 61.85
GC content: 23.6
Gene sequence:
>606_bases ATGAAAGATTATCAAAGTTTAACAGAACAAATCAATAATATTGAGAATACTTTAAAAGTCTCTGGAAGATACGTTTTTAA TAGTAAAAAACTAATTGTGGCTGGCGTGATGTTTTTGCTTATTCCCATTATTCAATATTTAATAAATATCTCATTTTGGA AAAATAGTTTTATCAACAATCATATAGAAATTGGTATATTTATAAACATAGTATTTTATATTGTTTTTTTTAAGTTAGTT TTTAGAATTACTAGAAGTTTCAAAAAATATCGATATCATCCCTCTATTAACTCTTATGTTAAAAAAGCAATTGATCTACA TGACGTCATTCTAAAAACTATGTTTACAACTATAATAGTATTATCTACATGTGGATATGGTAACTTAGCATTTCCCTTTG TATATATATTATTAGGTCTTATCTATAACCTATTTGGAAGGTTTTCATTAGATATTATTAGAAAAATCTCTATAAGTTAT ATTCTAATTGGTATCATATCAATATTCTTTGTTAAGAATTACAGCAATATTTATTGGCAATTCATGTTGATATATTTAGG TATAACTTACATATTCATGGGTAAAATACTAGAGAAAAATAGGTAA
Upstream 100 bases:
>100_bases TTCATTTCTCTATAAGTTTTATTATAAAAAAATAATAGTAAAAACTTGATAAACTATTAATTTAATAGTACTATTAAAAA ATAGTATGGAACAATAAGAT
Downstream 100 bases:
>100_bases AATATGCTAAATGATATACTCCATCAACCAATCAGAACAAAGATAATTACCTATCTTTATTCTGTAGATAGTGCTACATT CAAAGACATAAAAACCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKDYQSLTEQINNIENTLKVSGRYVFNSKKLIVAGVMFLLIPIIQYLINISFWKNSFINNHIEIGIFINIVFYIVFFKLV FRITRSFKKYRYHPSINSYVKKAIDLHDVILKTMFTTIIVLSTCGYGNLAFPFVYILLGLIYNLFGRFSLDIIRKISISY ILIGIISIFFVKNYSNIYWQFMLIYLGITYIFMGKILEKNR
Sequences:
>Translated_201_residues MKDYQSLTEQINNIENTLKVSGRYVFNSKKLIVAGVMFLLIPIIQYLINISFWKNSFINNHIEIGIFINIVFYIVFFKLV FRITRSFKKYRYHPSINSYVKKAIDLHDVILKTMFTTIIVLSTCGYGNLAFPFVYILLGLIYNLFGRFSLDIIRKISISY ILIGIISIFFVKNYSNIYWQFMLIYLGITYIFMGKILEKNR >Mature_201_residues MKDYQSLTEQINNIENTLKVSGRYVFNSKKLIVAGVMFLLIPIIQYLINISFWKNSFINNHIEIGIFINIVFYIVFFKLV FRITRSFKKYRYHPSINSYVKKAIDLHDVILKTMFTTIIVLSTCGYGNLAFPFVYILLGLIYNLFGRFSLDIIRKISISY ILIGIISIFFVKNYSNIYWQFMLIYLGITYIFMGKILEKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23765; Mature: 23765
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDYQSLTEQINNIENTLKVSGRYVFNSKKLIVAGVMFLLIPIIQYLINISFWKNSFINN CCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HIEIGIFINIVFYIVFFKLVFRITRSFKKYRYHPSINSYVKKAIDLHDVILKTMFTTIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSTCGYGNLAFPFVYILLGLIYNLFGRFSLDIIRKISISYILIGIISIFFVKNYSNIYWQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FMLIYLGITYIFMGKILEKNR HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDYQSLTEQINNIENTLKVSGRYVFNSKKLIVAGVMFLLIPIIQYLINISFWKNSFINN CCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HIEIGIFINIVFYIVFFKLVFRITRSFKKYRYHPSINSYVKKAIDLHDVILKTMFTTIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSTCGYGNLAFPFVYILLGLIYNLFGRFSLDIIRKISISYILIGIISIFFVKNYSNIYWQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FMLIYLGITYIFMGKILEKNR HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA