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The map label for this gene is yqgF [C]

Identifier: 89256536

GI number: 89256536

Start: 1165224

End: 1165634

Strand: Reverse

Name: yqgF [C]

Synonym: FTL_1215

Alternate gene names: 89256536

Gene position: 1165634-1165224 (Counterclockwise)

Preceding gene: 89256537

Following gene: 89256535

Centisome position: 61.48

GC content: 35.28

Gene sequence:

>411_bases
ATGTTTCAATCATTGATAGCTATTGATTATGGTAAAGCACGCATTGGTATAGCTAGTGGTCAAATGATTACTAAAACCGC
CACACCTATAGGCACTGTTGAAGCTTATGATGGTGTTCCTAACTGGATTGAACTTGATAAAATCATCAAACGCTGGAATC
CTTCAGATATCATTATTGGCCTACCATTAGATACTCAGAATTTTGAAACAGATATTACTAAATCTGCTAAAGATTTTGCC
AAAGAAGTACAGCAAAGGTATCAAAGAAAAGTTCATTTGATTAACGAAGCTTACTCTACTCGTGAAGCTAGATGGCGTTT
GGAAGAAGTCAAAAGTAAAAAAGTCTCTCATATTAAGGTAGATGCTCTGGCAGCCTGTGTAATTTTAGAAACATGGATGT
CTGAAAATTAA

Upstream 100 bases:

>100_bases
CATGAAAATAAGGTAAAGTGGCAAAATCATCTAGAACATGCTGGCTATACTTTGCAAAGTCTTGACACATTATTTAATAG
AAATACAGGTAATTGCTAAA

Downstream 100 bases:

>100_bases
TTTAAAAAAATTTTCAACTTGCTGAATAGTATCATTGACAATATTTAACTATATTGTAATTTTTTATTAAAATTTATAAT
CTGAAAATATTTATGCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFQSLIAIDYGKARIGIASGQMITKTATPIGTVEAYDGVPNWIELDKIIKRWNPSDIIIGLPLDTQNFETDITKSAKDFA
KEVQQRYQRKVHLINEAYSTREARWRLEEVKSKKVSHIKVDALAACVILETWMSEN

Sequences:

>Translated_136_residues
MFQSLIAIDYGKARIGIASGQMITKTATPIGTVEAYDGVPNWIELDKIIKRWNPSDIIIGLPLDTQNFETDITKSAKDFA
KEVQQRYQRKVHLINEAYSTREARWRLEEVKSKKVSHIKVDALAACVILETWMSEN
>Mature_136_residues
MFQSLIAIDYGKARIGIASGQMITKTATPIGTVEAYDGVPNWIELDKIIKRWNPSDIIIGLPLDTQNFETDITKSAKDFA
KEVQQRYQRKVHLINEAYSTREARWRLEEVKSKKVSHIKVDALAACVILETWMSEN

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=137, Percent_Identity=37.956204379562, Blast_Score=105, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 15510; Mature: 15510

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQSLIAIDYGKARIGIASGQMITKTATPIGTVEAYDGVPNWIELDKIIKRWNPSDIIIG
CCCCEEEEECCCEEEEECCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEEE
LPLDTQNFETDITKSAKDFAKEVQQRYQRKVHLINEAYSTREARWRLEEVKSKKVSHIKV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALAACVILETWMSEN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFQSLIAIDYGKARIGIASGQMITKTATPIGTVEAYDGVPNWIELDKIIKRWNPSDIIIG
CCCCEEEEECCCEEEEECCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEEE
LPLDTQNFETDITKSAKDFAKEVQQRYQRKVHLINEAYSTREARWRLEEVKSKKVSHIKV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DALAACVILETWMSEN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA