Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256534
Identifier: 89256534
GI number: 89256534
Start: 1162529
End: 1164424
Strand: Reverse
Name: 89256534
Synonym: FTL_1213
Alternate gene names: NA
Gene position: 1164424-1162529 (Counterclockwise)
Preceding gene: 89256535
Following gene: 89256533
Centisome position: 61.41
GC content: 26.05
Gene sequence:
>1896_bases ATGAGAAAAATTAAAACTATTTTATTAGTAAATATCTTATTTTCTATTTTATATATCAATATATCATTTGCTAATTTTGC TAAAAATGAAGATATGGGTGCAAACTATGAATATGTTAATAATAATATTTTTATCGATAATAATTATAAAGTTGATTGGA CTATGGAGGAGCAAATAAATATTTTCGATGAAACCGCTAGAAATTACTATAAACTTGTTCAATTATATTACCTTGAAGGT TTTGAAAGACTTAAGGTTATCGATGCAAGTATTGAAAATAATAACAAGAAATATGAAATCGATAAAAGTTTAATTGAAGA TAAAAATCTTGCTAGTGAAATAAATGGCTTCACAAATACAAGACAGATCTCTATTCCTTTTAAAAAAATTCAAGTGGGTA GTAAGATTAAAATAAAATATCATGACATAATAGAAAAACCGATCTTAGATAATCATTTCTCAACAACTTTGTATTATGGG AGTGATATTCTTCTAAAAAACTCAATAACTACTATTAAATCTAAAGTTCCTTTATATATATCTACTAATGACCCTTTTGG TGTTTTAGAGTTAAATTATTTTGAAAAAGATAAAACTTATTATTATAGTATTAAGCTTCTAAAGCCAATTAATAGTATCA CTGTTAACGAGCCAGAAAATAGTATTTTAAGCTCCAAAAAGCAAACATGGGTTAGTATATCTACTGATGTGACATATGAG AAAATAAATGAAACACTTGTGAATAAATATGAAAACCTTATACATCAACAAATCCCTGATGAACTTTTAGACGATTTACA AGCATTAAAACAACAAAAACTAAAAACTGATATAGAAATTATAGATAATGTAACAAGCCTAATTCAGAATAAGATAACAT ACCTAGGAGATTGGAAAAAAATCGATGCTGGTATTTATCCAAGAACAATGGAAGATATTATTGATACTGGTTATGGTGAT TGTAAAGATTATTCTTTGTTGACAATCGCTAGCTTAAGGTATTTAGGACTGTCTGCTAGATTTGCTCTAGTAAATAGAGG CGAGATAATTCAAGAATATTCTGATAAAACCCTGCCTAGTATTAATAATTTTAATCATGCAATAGTATATGTTAAAGGCT TTGATGAAAAAGAGTATTGGATTGATCCAACTAATAATATTAGTATGACAAATGGATTATTTCCTGATATAGCTAATCGT AAAGCATTAATTCTAGATCCTGAAGGTTTTATTTTTACTCAAATTCCCAACATTGATTATAAAAAATCTAAAATAGTTTC AATCTTTAAATATGATTTAGAAGAAGATCTTATTTATGTTAAAAAGGATATTACTCTTGAAAAAGAGGCTGCTATTATGT TTACCGGATTAGAATTATTTACAAGCAAAGATATTATTGAGGATAGCATCTATAACAGTTTCCTTGAAGATGAAAGAAGC ATTCCTAAATCGCAAAGAGTCAAGTCTGTTATTCCAAATTTAAACTCTAGGATAGTTAAAAATATAGATTTCTCGTTCGA ATATATATTAGATAACCCATATCTTGTAAGTAACTTAGGAAAATTATTATCATTAAACAGTAATTATAGTTTTATCAGTC CTCCAGAAGATAGTGTAAATGATATATATATAGGCCCTCCTATTACTGTAATAAAAAAGTATATCTTTAATACAAAGATT AATGGTATAGATAAATTGAATTCGACACTATCAACACCATGGATAGATTTAAATAGAAAAGCATATATAAGTAAAGATGG AGAGAGTATTATAGAACAGCAATATATAATTAAAAAGTCTTTTTTAAGTTTTGAAGATAGGCAATCAGAACAATATAAAC TCTTGAAAAAAGGATTTGATAAGTCATTTAAAAGGTTATTTTTAATACTAAGCTAG
Upstream 100 bases:
>100_bases CAATAAAATATAAAGTTAATTTATGCTATGAAAGTATTTTATTTTATATTTTATTTTTGGATAATGTTCTTTTCATAAAA AAATATTAAGAAAATAAATA
Downstream 100 bases:
>100_bases AAAACCAGTTTTTAAGCAGATCAACATCTAGATATTTATGATATTTTCACTTAAAATTACTAACATATTTTATTCAACTA TAATCTTAATCTAGGTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MRKIKTILLVNILFSILYINISFANFAKNEDMGANYEYVNNNIFIDNNYKVDWTMEEQINIFDETARNYYKLVQLYYLEG FERLKVIDASIENNNKKYEIDKSLIEDKNLASEINGFTNTRQISIPFKKIQVGSKIKIKYHDIIEKPILDNHFSTTLYYG SDILLKNSITTIKSKVPLYISTNDPFGVLELNYFEKDKTYYYSIKLLKPINSITVNEPENSILSSKKQTWVSISTDVTYE KINETLVNKYENLIHQQIPDELLDDLQALKQQKLKTDIEIIDNVTSLIQNKITYLGDWKKIDAGIYPRTMEDIIDTGYGD CKDYSLLTIASLRYLGLSARFALVNRGEIIQEYSDKTLPSINNFNHAIVYVKGFDEKEYWIDPTNNISMTNGLFPDIANR KALILDPEGFIFTQIPNIDYKKSKIVSIFKYDLEEDLIYVKKDITLEKEAAIMFTGLELFTSKDIIEDSIYNSFLEDERS IPKSQRVKSVIPNLNSRIVKNIDFSFEYILDNPYLVSNLGKLLSLNSNYSFISPPEDSVNDIYIGPPITVIKKYIFNTKI NGIDKLNSTLSTPWIDLNRKAYISKDGESIIEQQYIIKKSFLSFEDRQSEQYKLLKKGFDKSFKRLFLILS
Sequences:
>Translated_631_residues MRKIKTILLVNILFSILYINISFANFAKNEDMGANYEYVNNNIFIDNNYKVDWTMEEQINIFDETARNYYKLVQLYYLEG FERLKVIDASIENNNKKYEIDKSLIEDKNLASEINGFTNTRQISIPFKKIQVGSKIKIKYHDIIEKPILDNHFSTTLYYG SDILLKNSITTIKSKVPLYISTNDPFGVLELNYFEKDKTYYYSIKLLKPINSITVNEPENSILSSKKQTWVSISTDVTYE KINETLVNKYENLIHQQIPDELLDDLQALKQQKLKTDIEIIDNVTSLIQNKITYLGDWKKIDAGIYPRTMEDIIDTGYGD CKDYSLLTIASLRYLGLSARFALVNRGEIIQEYSDKTLPSINNFNHAIVYVKGFDEKEYWIDPTNNISMTNGLFPDIANR KALILDPEGFIFTQIPNIDYKKSKIVSIFKYDLEEDLIYVKKDITLEKEAAIMFTGLELFTSKDIIEDSIYNSFLEDERS IPKSQRVKSVIPNLNSRIVKNIDFSFEYILDNPYLVSNLGKLLSLNSNYSFISPPEDSVNDIYIGPPITVIKKYIFNTKI NGIDKLNSTLSTPWIDLNRKAYISKDGESIIEQQYIIKKSFLSFEDRQSEQYKLLKKGFDKSFKRLFLILS >Mature_631_residues MRKIKTILLVNILFSILYINISFANFAKNEDMGANYEYVNNNIFIDNNYKVDWTMEEQINIFDETARNYYKLVQLYYLEG FERLKVIDASIENNNKKYEIDKSLIEDKNLASEINGFTNTRQISIPFKKIQVGSKIKIKYHDIIEKPILDNHFSTTLYYG SDILLKNSITTIKSKVPLYISTNDPFGVLELNYFEKDKTYYYSIKLLKPINSITVNEPENSILSSKKQTWVSISTDVTYE KINETLVNKYENLIHQQIPDELLDDLQALKQQKLKTDIEIIDNVTSLIQNKITYLGDWKKIDAGIYPRTMEDIIDTGYGD CKDYSLLTIASLRYLGLSARFALVNRGEIIQEYSDKTLPSINNFNHAIVYVKGFDEKEYWIDPTNNISMTNGLFPDIANR KALILDPEGFIFTQIPNIDYKKSKIVSIFKYDLEEDLIYVKKDITLEKEAAIMFTGLELFTSKDIIEDSIYNSFLEDERS IPKSQRVKSVIPNLNSRIVKNIDFSFEYILDNPYLVSNLGKLLSLNSNYSFISPPEDSVNDIYIGPPITVIKKYIFNTKI NGIDKLNSTLSTPWIDLNRKAYISKDGESIIEQQYIIKKSFLSFEDRQSEQYKLLKKGFDKSFKRLFLILS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73309; Mature: 73309
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIKTILLVNILFSILYINISFANFAKNEDMGANYEYVNNNIFIDNNYKVDWTMEEQIN CCHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCEEEECCEEEECCCEEEEEEEHHHHH IFDETARNYYKLVQLYYLEGFERLKVIDASIENNNKKYEIDKSLIEDKNLASEINGFTNT HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCEEEECHHHHHHHHHHHHHCCCCCC RQISIPFKKIQVGSKIKIKYHDIIEKPILDNHFSTTLYYGSDILLKNSITTIKSKVPLYI EEEECCHHHEECCCEEEEEEHHHHCCCCCCCCCCEEEEECCCEEEECCHHHHHCCCCEEE STNDPFGVLELNYFEKDKTYYYSIKLLKPINSITVNEPENSILSSKKQTWVSISTDVTYE ECCCCCEEEEEEEEECCCEEEEEEEEECCCCCEEECCCHHHHHCCCCCEEEEEECCCCHH KINETLVNKYENLIHQQIPDELLDDLQALKQQKLKTDIEIIDNVTSLIQNKITYLGDWKK HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IDAGIYPRTMEDIIDTGYGDCKDYSLLTIASLRYLGLSARFALVNRGEIIQEYSDKTLPS ECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCC INNFNHAIVYVKGFDEKEYWIDPTNNISMTNGLFPDIANRKALILDPEGFIFTQIPNIDY CCCCCEEEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCC KKSKIVSIFKYDLEEDLIYVKKDITLEKEAAIMFTGLELFTSKDIIEDSIYNSFLEDERS CHHHHHHHEECCCCCCEEEEEECCEEECCCEEEEECHHHHHCHHHHHHHHHHHHHHHHHC IPKSQRVKSVIPNLNSRIVKNIDFSFEYILDNPYLVSNLGKLLSLNSNYSFISPPEDSVN CCHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHCCHHHEEECCCCCCCCCCCCCCC DIYIGPPITVIKKYIFNTKINGIDKLNSTLSTPWIDLNRKAYISKDGESIIEQQYIIKKS EEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCEEEECCCHHHHHHHHHHHHHH FLSFEDRQSEQYKLLKKGFDKSFKRLFLILS HCCCCCCCHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MRKIKTILLVNILFSILYINISFANFAKNEDMGANYEYVNNNIFIDNNYKVDWTMEEQIN CCHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCEEEECCEEEECCCEEEEEEEHHHHH IFDETARNYYKLVQLYYLEGFERLKVIDASIENNNKKYEIDKSLIEDKNLASEINGFTNT HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCEEEECHHHHHHHHHHHHHCCCCCC RQISIPFKKIQVGSKIKIKYHDIIEKPILDNHFSTTLYYGSDILLKNSITTIKSKVPLYI EEEECCHHHEECCCEEEEEEHHHHCCCCCCCCCCEEEEECCCEEEECCHHHHHCCCCEEE STNDPFGVLELNYFEKDKTYYYSIKLLKPINSITVNEPENSILSSKKQTWVSISTDVTYE ECCCCCEEEEEEEEECCCEEEEEEEEECCCCCEEECCCHHHHHCCCCCEEEEEECCCCHH KINETLVNKYENLIHQQIPDELLDDLQALKQQKLKTDIEIIDNVTSLIQNKITYLGDWKK HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IDAGIYPRTMEDIIDTGYGDCKDYSLLTIASLRYLGLSARFALVNRGEIIQEYSDKTLPS ECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCC INNFNHAIVYVKGFDEKEYWIDPTNNISMTNGLFPDIANRKALILDPEGFIFTQIPNIDY CCCCCEEEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCC KKSKIVSIFKYDLEEDLIYVKKDITLEKEAAIMFTGLELFTSKDIIEDSIYNSFLEDERS CHHHHHHHEECCCCCCEEEEEECCEEECCCEEEEECHHHHHCHHHHHHHHHHHHHHHHHC IPKSQRVKSVIPNLNSRIVKNIDFSFEYILDNPYLVSNLGKLLSLNSNYSFISPPEDSVN CCHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHHCCHHHEEECCCCCCCCCCCCCCC DIYIGPPITVIKKYIFNTKINGIDKLNSTLSTPWIDLNRKAYISKDGESIIEQQYIIKKS EEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCEEEECCCHHHHHHHHHHHHHH FLSFEDRQSEQYKLLKKGFDKSFKRLFLILS HCCCCCCCHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA