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The map label for this gene is ydfC [H]

Identifier: 89256517

GI number: 89256517

Start: 1144282

End: 1145118

Strand: Direct

Name: ydfC [H]

Synonym: FTL_1196

Alternate gene names: 89256517

Gene position: 1144282-1145118 (Clockwise)

Preceding gene: 89256516

Following gene: 89256518

Centisome position: 60.35

GC content: 29.75

Gene sequence:

>837_bases
ATGTGGTCAACCGCTTTTATCGGAATTCGTTATTTAATGTTAAACGGATTTAGTGCTAGGGGATTATCATTAACTAGATA
TGCGATAGCAAGTATGGTGATGCTGATAATATTTATTAGACAAAAAAATAAAACTCCACCTAGTTTAAAAGATTTATTTA
GGTTTGCAATTTTAGGTTTTTTTGGCTTTTTTGCATATAACGTATTTCTAAATTCTGGTGAGTCAAGAATCACTGCAGCA
GGCGCAAACTTTATCATCTCTCAAGCACCAATTATTGTAGCAATATTAGCATTTGTGTTTTGGGGTGAGAAAATCAACAA
ATATGGTATCTTTGGTTTTGTTATAGCTATAATAGGTGCCACAATAATTTTTTTCTCAAAAAATGATACATCATTTGAAT
TTATAGGAATTTGTCTAGTTTATGGTGCTTGTTTTTCAGGAGCTATTTATTCAGTTTTCCAAAAAAGCTTATTTATAAAA
TTTCATCCAATTGAGGCTATAACTTATTGTATTTGGTTTGGGACGATTATGCTTTTAATATATTCTAATCAAGCATATAC
AGAATTAGCTACAGCAGATTTATCAAGTATACTAGTTGTAGTGTATATAGGTATATTTCCTGGTGCATTGGGTTATCTAT
TTTGGGGGTATGCTTTTAGACATTTATCAGCAACTATTGCCATTAGCTTTTTATATTTCATGCCAATTATTTCTTTATTT
CTTGGCTGGATTTTTCTAGGAGAAACAGAAGCATATTCTGTAATAGTTGGAGGAATAATAAGTGTTATTGGAGCATTTAT
AATTAGTAAATATGGATTAAATAAAAAAACTAACTAA

Upstream 100 bases:

>100_bases
AAAAATTTTGTGATGCTATCTCTTATGTGTTTAACAAAATACTCTCGGATTAACTATATCTACTAAAAAAGTTTTAATTT
TGTTGTTGCTAACCATAACA

Downstream 100 bases:

>100_bases
AACCTTTAAAGTTTGTTACTCGCAACATTTTAATAAAAGTCTTTTTTGTCTATAATATCAGCAAGTTTTGAAATAAAGGA
TAAATATGCAAATAGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MWSTAFIGIRYLMLNGFSARGLSLTRYAIASMVMLIIFIRQKNKTPPSLKDLFRFAILGFFGFFAYNVFLNSGESRITAA
GANFIISQAPIIVAILAFVFWGEKINKYGIFGFVIAIIGATIIFFSKNDTSFEFIGICLVYGACFSGAIYSVFQKSLFIK
FHPIEAITYCIWFGTIMLLIYSNQAYTELATADLSSILVVVYIGIFPGALGYLFWGYAFRHLSATIAISFLYFMPIISLF
LGWIFLGETEAYSVIVGGIISVIGAFIISKYGLNKKTN

Sequences:

>Translated_278_residues
MWSTAFIGIRYLMLNGFSARGLSLTRYAIASMVMLIIFIRQKNKTPPSLKDLFRFAILGFFGFFAYNVFLNSGESRITAA
GANFIISQAPIIVAILAFVFWGEKINKYGIFGFVIAIIGATIIFFSKNDTSFEFIGICLVYGACFSGAIYSVFQKSLFIK
FHPIEAITYCIWFGTIMLLIYSNQAYTELATADLSSILVVVYIGIFPGALGYLFWGYAFRHLSATIAISFLYFMPIISLF
LGWIFLGETEAYSVIVGGIISVIGAFIISKYGLNKKTN
>Mature_278_residues
MWSTAFIGIRYLMLNGFSARGLSLTRYAIASMVMLIIFIRQKNKTPPSLKDLFRFAILGFFGFFAYNVFLNSGESRITAA
GANFIISQAPIIVAILAFVFWGEKINKYGIFGFVIAIIGATIIFFSKNDTSFEFIGICLVYGACFSGAIYSVFQKSLFIK
FHPIEAITYCIWFGTIMLLIYSNQAYTELATADLSSILVVVYIGIFPGALGYLFWGYAFRHLSATIAISFLYFMPIISLF
LGWIFLGETEAYSVIVGGIISVIGAFIISKYGLNKKTN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30954; Mature: 30954

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSTAFIGIRYLMLNGFSARGLSLTRYAIASMVMLIIFIRQKNKTPPSLKDLFRFAILGF
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FGFFAYNVFLNSGESRITAAGANFIISQAPIIVAILAFVFWGEKINKYGIFGFVIAIIGA
HHHHHHHHHHCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIIFFSKNDTSFEFIGICLVYGACFSGAIYSVFQKSLFIKFHPIEAITYCIWFGTIMLLI
HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
YSNQAYTELATADLSSILVVVYIGIFPGALGYLFWGYAFRHLSATIAISFLYFMPIISLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWIFLGETEAYSVIVGGIISVIGAFIISKYGLNKKTN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWSTAFIGIRYLMLNGFSARGLSLTRYAIASMVMLIIFIRQKNKTPPSLKDLFRFAILGF
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FGFFAYNVFLNSGESRITAAGANFIISQAPIIVAILAFVFWGEKINKYGIFGFVIAIIGA
HHHHHHHHHHCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIIFFSKNDTSFEFIGICLVYGACFSGAIYSVFQKSLFIKFHPIEAITYCIWFGTIMLLI
HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
YSNQAYTELATADLSSILVVVYIGIFPGALGYLFWGYAFRHLSATIAISFLYFMPIISLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWIFLGETEAYSVIVGGIISVIGAFIISKYGLNKKTN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]