| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is pgk [H]
Identifier: 89256471
GI number: 89256471
Start: 1089209
End: 1090387
Strand: Direct
Name: pgk [H]
Synonym: FTL_1147
Alternate gene names: 89256471
Gene position: 1089209-1090387 (Clockwise)
Preceding gene: 89256470
Following gene: 89256472
Centisome position: 57.45
GC content: 36.56
Gene sequence:
>1179_bases ATGAGTTTTCTAACATTGAAAGATGTTGATTTAAAAGATAAAAAAGTCTTGGTTCGTGTTGACTTCAACGTACCTGTTAA AGATGGTAAGGTAACAAGTAAAGTTAGAATTGAAGCGGCTATTCCGACTATTCAATATATTCTAGATCAAGGTGGAGCTG TGATTCTGATGTCACACCTTGGTCGTCCTACAGAGGGTGAGTATGATTCTCAGTTCTCTCTAGAGCCTGTTGCTAAAGCT TTATCTGAAATTATCAATAAGCCGGTTAAGTTTGCTAAAGACTGGTTAGATGGTGTTGATGTTAAAGCTGGTGAAATTGT CATGTGTGAAAATGTCCGCTTTAATATTGGTGAGAAAAAATCAACAGATGATTTATCTAAAAAGATTGCAAGCTTAGGTG ATGTGTTTGTTATGGACGCTTTTGCTACAGCGCATAGAGCTCAAGCTTCGACCTACGGTGTTGCTAAGTATATTCCTGTA GCATGTGCAGGGATATTGTTAACTAATGAAATTCAAGCATTAGAAAAAGCTTTAAAATCGCCGAAAAAACCAATGGCAGC AATAGTTGGAGGGTCTAAGGTCTCTACTAAACTATCGGTGCTAAATAACCTTCTTGATAAGGTTGAAATTCTTATTGTTG GTGGTGGTATTGCTAATACTTTCATAAAAGCAGAAGGTTTTGATGTTGGTAATTCATTGTATGAACAAGATCTTGTTGCT GAAGCAACAGAGATTTTAGCTAAAGCTAAGGCTTTAGGGGTTAATATTCCTGTGCCAGTTGATGTAAGAGTTGCTAAAGA GTTTAGCGAAAATGCCCAAGCAATCATTAAAAAGGTTTCCTATGTTGTTGCGGATGAGATGATTCTAGATATAGGTCCAG AATCTCAAAAGATAATTGCTGAGCTGTTAAAATCAGCAAATACTATTTTATGGAATGGACCTGTTGGAGTATTTGAGTTT GATAACTTTGCAGAGGGTACAAAAGCTTTATCTTTAGCTATAGCACAATCGCACGCTTTTTCAGTAGCTGGTGGTGGTGA TACTATTGCTGCGATAGAAAAATTTGGCATTAAAGACCAAGTTTCTTATATATCAACAGCTGGTGGAGCATTCTTAGAGT TTCTTGAAGGCAAGAAATTACCAGCTATAGAGATACTTAAAGAAAAAGCAATCAGGTAA
Upstream 100 bases:
>100_bases TAAAGTAGTATCTTGGTATGACAATGAAATGTCTTATACAAATCAAATGGTTAGAGTAGTAGAGTACTTCGGAGCTCTAT AAACATTATAGGTGATATAA
Downstream 100 bases:
>100_bases TTTAGGATAATTTATATGAGAAGAACAAAAATTTTAGCTACTCTTGGTCCTGCTAGTGAATCAAGAGAAGCTCTAACAGA GATGATTAAAGCAGGGGTTA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKA LSEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNIGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPV ACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVA EATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEF DNFAEGTKALSLAIAQSHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKEKAIR
Sequences:
>Translated_392_residues MSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKA LSEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNIGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPV ACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVA EATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEF DNFAEGTKALSLAIAQSHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKEKAIR >Mature_391_residues SFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKAL SEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNIGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVA CAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAE ATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFD NFAEGTKALSLAIAQSHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKEKAIR
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=413, Percent_Identity=42.3728813559322, Blast_Score=308, Evalue=7e-84, Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=42.5790754257908, Blast_Score=303, Evalue=1e-82, Organism=Escherichia coli, GI1789294, Length=390, Percent_Identity=62.8205128205128, Blast_Score=483, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17508823, Length=414, Percent_Identity=43.4782608695652, Blast_Score=321, Evalue=5e-88, Organism=Saccharomyces cerevisiae, GI6319857, Length=414, Percent_Identity=43.2367149758454, Blast_Score=306, Evalue=3e-84, Organism=Drosophila melanogaster, GI24581203, Length=413, Percent_Identity=38.9830508474576, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI17136394, Length=416, Percent_Identity=39.6634615384615, Blast_Score=272, Evalue=3e-73,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42011; Mature: 41880
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGAVILMSHL CCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECC GRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNIGEKK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEECCCCCC STDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKS CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVA CCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCHHHHEEEECCCCCCHHHHHHHHHH EATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIA HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHH ELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQSHAFSVAGGGDTIAAIEKFGIKDQ HHHHCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCHHH VSYISTAGGAFLEFLEGKKLPAIEILKEKAIR HHHHHHCHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure SFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGAVILMSHL CEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEEEEECC GRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNIGEKK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEECCCCCC STDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKS CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVA CCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCHHHHEEEECCCCCCHHHHHHHHHH EATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIA HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHH ELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQSHAFSVAGGGDTIAAIEKFGIKDQ HHHHCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCHHH VSYISTAGGAFLEFLEGKKLPAIEILKEKAIR HHHHHHCHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA