Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yceA [C]
Identifier: 89256443
GI number: 89256443
Start: 1063806
End: 1064792
Strand: Reverse
Name: yceA [C]
Synonym: FTL_1118
Alternate gene names: 89256443
Gene position: 1064792-1063806 (Counterclockwise)
Preceding gene: 89256450
Following gene: 89256439
Centisome position: 56.16
GC content: 33.84
Gene sequence:
>987_bases ATGTCACAAATAGTTGTCTGCGCAATGTATAAATTTGTTACATTAGAAGATTTTGAAGCCATGCGTCAACCTCTTCTAGA TACTATGATAAAAAACAATGTCAAAGGTACACTACTTTTAGCTAATGAAGGAATCAATGGTACTGTTGCAGGAACGCGTG AAAGTATAGATAACCTACTAGCTTATTTAAAAGCAGATCCACGTCTAGTAGATATTGATTATAAAGAGTCATATCATCAA GAAATGCCCTTTTACCGTTCAAAAGTAAAGCTTAAAAAAGAGATTGTTACTCTTGGTATTGATGAAATTGACCCTAATAA AATTTGTGGTAAATATGTTGAGCCAAAAGATTGGAATGACTTGATCTCTGATCCTGAAACTGTACTTATTGATACTCGTA ATGAATATGAAATAGAAATTGGTACTTTTAAAAACGCTATTAACCCGCACACTGAAAATTTTCGCGAATTCCCTCAATAT GTCGATGAGAATCTCGATCCTAAAAAACATAAAAAAGTAGCTATGTTTTGTACTGGTGGAATTAGATGTGAAAAATCCAC AGCTCTGCTTAAAGCCAAAGGTTTTGATGAAGTTTATCATCTAAAAGGAGGTATTCTTAAGTATCTAGAAGAAGTACCAA AAGAAAAATCTATGTGGCAAGGTGAGTGCTTTGTATTTGATTCAAGAGTTGCGGTAAATCACGATCTTGAAAAAGGCAAC TATGATCAATGTTTTGCTTGTCGCATGCCAATTACAGAAGATGATAAAAAACGTCCTGAATATGTCAAAGGAATAAGCTG TCATCATTGTTATGATAAAGTTACTGAAAAACAAAAAGCTCGTTTTGCTGAGCGTGAAAAGCAATCACAATTAGCTGCTG AAAAAGGTTTCTCTCATGTTGGTGATGAGGCAAAAAAACTTGCACAACTAAATAAACAAAAAAAGCAGCAAGCTAAAGAA GCAGCTCGTAAAAAAGCTCAACAATAG
Upstream 100 bases:
>100_bases AATTATTGTCCTGAGGATTTTGGCAAAAGCATTTCAATATTTGTGGCATAATGTATAATATGATGTCTTTAATTAATAAC TAACTTGTTTGGGAATATAT
Downstream 100 bases:
>100_bases ATATAAATCGTCAACCTAAAAATTAACTTTATCTTTGTGCTTGATACAGACATTTTTATACTGATTAAGAAATCACTGCT TTCGTTGAAATAACGATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKESYHQ EMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQY VDENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLEKGN YDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQQAKE AARKKAQQ
Sequences:
>Translated_328_residues MSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKESYHQ EMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQY VDENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLEKGN YDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQQAKE AARKKAQQ >Mature_327_residues SQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKESYHQE MPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQYV DENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLEKGNY DQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQQAKEA ARKKAQQ
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=221, Percent_Identity=38.4615384615385, Blast_Score=138, Evalue=6e-33, Organism=Escherichia coli, GI1787294, Length=232, Percent_Identity=34.9137931034483, Blast_Score=137, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1085_FRAT1 (Q14HD0)
Other databases:
- EMBL: AM286280 - RefSeq: YP_667196.1 - ProteinModelPortal: Q14HD0 - STRING: Q14HD0 - GeneID: 4199576 - GenomeReviews: AM286280_GR - KEGG: ftf:FTF1085 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: QVYHLKG - PhylomeDB: Q14HD0 - ProtClustDB: CLSK986343 - BioCyc: FTUL393115:FTF1085-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 37762; Mature: 37630
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLL CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH AYLKADPRLVDIDYKESYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWND HHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHH LISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQYVDENLDPKKHKKVAMFCTGG HHCCCCEEEEECCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEEECCC IRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLEKGN EEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEECCCCCCCC YDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHV CCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC GDEAKKLAQLNKQKKQQAKEAARKKAQQ CHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLL CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH AYLKADPRLVDIDYKESYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWND HHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHH LISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQYVDENLDPKKHKKVAMFCTGG HHCCCCEEEEECCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEEECCC IRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLEKGN EEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEECCCCCCCC YDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHV CCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC GDEAKKLAQLNKQKKQQAKEAARKKAQQ CHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA