Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256439
Identifier: 89256439
GI number: 89256439
Start: 1058905
End: 1059411
Strand: Reverse
Name: 89256439
Synonym: FTL_1114
Alternate gene names: NA
Gene position: 1059411-1058905 (Counterclockwise)
Preceding gene: 89256443
Following gene: 89256438
Centisome position: 55.88
GC content: 25.05
Gene sequence:
>507_bases ATGTCTAAGTTACTAATTATGATTGATATCCAGGAAGGTTTTAGCTCTAAAGGAGTTGATTATATTGTAGGCAAATTTAA TAAAAATTATAGCAAATTTGAATATGTTTGTTTTTGTACGTTTGAAAATAAGAAAAATTCACTTTTTGAGAGACAGTTAA AGTGGCAAGATTTTCAAAATCAGCGTGATAGAAAACTAATCAAAAAACTCAAAACTTCAAAAAATTGTTATTTTATAAAT CATCATAATTATACAATTTATAATGCTGATATGAAAAAACTAATTAACAAATTAACTCCACAACAAATTTATCTAGCAGG AATATTTTATGATGTATGTGTATTAAAAGCAGCTATAGATATGTTTGATGATGGTGTTATAAGTTATATTATTGAAGATT TATGTACTTCACTTCATGGTCAGGATGCTCATAAAAATGCTTTTAAAAGTCTCAAACTAGCATTAGGAGAAGATAAAATA ACCTCAATTAGTGATATAAAATTATGA
Upstream 100 bases:
>100_bases ATATTTAAGTTCCTAGACAAGTTACTAAGTAATAATTTGAAATAAATCAATATAAATATTAATATAAAAATAAATTTAAT ATCAAGTGAACATAAGAGTA
Downstream 100 bases:
>100_bases ATTATCTTTACGAGTGGTTGATTAGACCATACCATAATTATGACGCATATATGATTTATCTAGAAGCTATTGCAGCGTCA ATAGGTATTGCTAGTGTTAT
Product: isochorismatase hydrolase family protein
Products: NA
Alternate protein names: Isochorismatase Family Protein; Isochorismatase Hydrolase Family Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSKLLIMIDIQEGFSSKGVDYIVGKFNKNYSKFEYVCFCTFENKKNSLFERQLKWQDFQNQRDRKLIKKLKTSKNCYFIN HHNYTIYNADMKKLINKLTPQQIYLAGIFYDVCVLKAAIDMFDDGVISYIIEDLCTSLHGQDAHKNAFKSLKLALGEDKI TSISDIKL
Sequences:
>Translated_168_residues MSKLLIMIDIQEGFSSKGVDYIVGKFNKNYSKFEYVCFCTFENKKNSLFERQLKWQDFQNQRDRKLIKKLKTSKNCYFIN HHNYTIYNADMKKLINKLTPQQIYLAGIFYDVCVLKAAIDMFDDGVISYIIEDLCTSLHGQDAHKNAFKSLKLALGEDKI TSISDIKL >Mature_167_residues SKLLIMIDIQEGFSSKGVDYIVGKFNKNYSKFEYVCFCTFENKKNSLFERQLKWQDFQNQRDRKLIKKLKTSKNCYFINH HNYTIYNADMKKLINKLTPQQIYLAGIFYDVCVLKAAIDMFDDGVISYIIEDLCTSLHGQDAHKNAFKSLKLALGEDKIT SISDIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19608; Mature: 19477
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLIMIDIQEGFSSKGVDYIVGKFNKNYSKFEYVCFCTFENKKNSLFERQLKWQDFQN CCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCC QRDRKLIKKLKTSKNCYFINHHNYTIYNADMKKLINKLTPQQIYLAGIFYDVCVLKAAID HHHHHHHHHHHCCCCEEEEECCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH MFDDGVISYIIEDLCTSLHGQDAHKNAFKSLKLALGEDKITSISDIKL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SKLLIMIDIQEGFSSKGVDYIVGKFNKNYSKFEYVCFCTFENKKNSLFERQLKWQDFQN CCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCC QRDRKLIKKLKTSKNCYFINHHNYTIYNADMKKLINKLTPQQIYLAGIFYDVCVLKAAID HHHHHHHHHHHCCCCEEEEECCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH MFDDGVISYIIEDLCTSLHGQDAHKNAFKSLKLALGEDKITSISDIKL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA