Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is pnuC [C]
Identifier: 89256438
GI number: 89256438
Start: 1058231
End: 1058908
Strand: Reverse
Name: pnuC [C]
Synonym: FTL_1113
Alternate gene names: 89256438
Gene position: 1058908-1058231 (Counterclockwise)
Preceding gene: 89256439
Following gene: 89256436
Centisome position: 55.85
GC content: 26.99
Gene sequence:
>678_bases ATGAATTATCTTTACGAGTGGTTGATTAGACCATACCATAATTATGACGCATATATGATTTATCTAGAAGCTATTGCAGC GTCAATAGGTATTGCTAGTGTTATATGTGCCTATAAGCGTAGTATTTTTGTATATATATTCGGTTTTATATCAGCATTAA TATATGTCTATTTATTATATAGTTGGGAACTTTTTGGTGATATGATTTTAAACTGTTATTTTCTGTTGGCTAATATTCTA GGTTTTTTTGCATTGTTTAAGCATATTGAAAAAAACAGTAAAACTATTATAAAAATTAAAAAAGCCACAGTTAGTGAAAA AAATAAAGCTTTGATAATATTTATTTTGACTGTATCTGTCACTCCTTTTTTTTATGCGTATCAAAAAAATACAACTATTT TAAATTTACCAACTTATAGCTATGTCGATAGTTTTCTGACAGCAACTTGTTTTAGTGCTTTATATTTTCAAATTACTAGA AGTATTAATGCTTGGTATTTATGGATAACCGCCGATATCATATATATTCCTTTATTTGTCTATAAAGGAGTTGGAATTAC TGCTATTCAATATTTGATATTCTTAAATCTTGTCTACTTTACACTAAGAAAATGGCAAATAACCTTAAAAAGACAGCAAA ATACCAACGTTGATAACATTATAATGCTCAACAGATGA
Upstream 100 bases:
>100_bases GTACTTCACTTCATGGTCAGGATGCTCATAAAAATGCTTTTAAAAGTCTCAAACTAGCATTAGGAGAAGATAAAATAACC TCAATTAGTGATATAAAATT
Downstream 100 bases:
>100_bases GAGAATAATAAGATGTCCAAGAACGCTTTAGTTATTATTGATGTGCAAAATTATTTTGTAAATGAGCATACCAAAACATT ACCATAATTTAATTCAGCAC
Product: hypothetical protein
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: Nicotinamide Mononucleotide Transporter; Nucleoside/Purine/Pyrimidine Transporter PnuC; Nicotinamide Mononucleotide Transporter Pnuc; Nicotinamide Mononucleotide Transport Family Protein; Nucleoside/Purine/Pyrimidine Transport Protein PnuC; Ribosyl Nicotinamide Transporter PnuC-Like Protein
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MNYLYEWLIRPYHNYDAYMIYLEAIAASIGIASVICAYKRSIFVYIFGFISALIYVYLLYSWELFGDMILNCYFLLANIL GFFALFKHIEKNSKTIIKIKKATVSEKNKALIIFILTVSVTPFFYAYQKNTTILNLPTYSYVDSFLTATCFSALYFQITR SINAWYLWITADIIYIPLFVYKGVGITAIQYLIFLNLVYFTLRKWQITLKRQQNTNVDNIIMLNR
Sequences:
>Translated_225_residues MNYLYEWLIRPYHNYDAYMIYLEAIAASIGIASVICAYKRSIFVYIFGFISALIYVYLLYSWELFGDMILNCYFLLANIL GFFALFKHIEKNSKTIIKIKKATVSEKNKALIIFILTVSVTPFFYAYQKNTTILNLPTYSYVDSFLTATCFSALYFQITR SINAWYLWITADIIYIPLFVYKGVGITAIQYLIFLNLVYFTLRKWQITLKRQQNTNVDNIIMLNR >Mature_225_residues MNYLYEWLIRPYHNYDAYMIYLEAIAASIGIASVICAYKRSIFVYIFGFISALIYVYLLYSWELFGDMILNCYFLLANIL GFFALFKHIEKNSKTIIKIKKATVSEKNKALIIFILTVSVTPFFYAYQKNTTILNLPTYSYVDSFLTATCFSALYFQITR SINAWYLWITADIIYIPLFVYKGVGITAIQYLIFLNLVYFTLRKWQITLKRQQNTNVDNIIMLNR
Specific function: Required For Nmn Transport Across The Cytoplasmic Membrane. [C]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26495; Mature: 26495
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLYEWLIRPYHNYDAYMIYLEAIAASIGIASVICAYKRSIFVYIFGFISALIYVYLLY CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWELFGDMILNCYFLLANILGFFALFKHIEKNSKTIIKIKKATVSEKNKALIIFILTVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCEEEEEEEEEHH TPFFYAYQKNTTILNLPTYSYVDSFLTATCFSALYFQITRSINAWYLWITADIIYIPLFV CHHEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHH YKGVGITAIQYLIFLNLVYFTLRKWQITLKRQQNTNVDNIIMLNR HCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC >Mature Secondary Structure MNYLYEWLIRPYHNYDAYMIYLEAIAASIGIASVICAYKRSIFVYIFGFISALIYVYLLY CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWELFGDMILNCYFLLANILGFFALFKHIEKNSKTIIKIKKATVSEKNKALIIFILTVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCEEEEEEEEEHH TPFFYAYQKNTTILNLPTYSYVDSFLTATCFSALYFQITRSINAWYLWITADIIYIPLFV CHHEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHH YKGVGITAIQYLIFLNLVYFTLRKWQITLKRQQNTNVDNIIMLNR HCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA