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The map label for this gene is ybeB [H]

Identifier: 89256428

GI number: 89256428

Start: 1046424

End: 1046831

Strand: Reverse

Name: ybeB [H]

Synonym: FTL_1100

Alternate gene names: 89256428

Gene position: 1046831-1046424 (Counterclockwise)

Preceding gene: 89256430

Following gene: 89256427

Centisome position: 55.21

GC content: 28.19

Gene sequence:

>408_bases
ATGATATCATCATTTAGATTAACTTATGTTATAATCTTAATCCAAATTTATAAAACTTTAATATTTAATTTCATGACAAC
AGATCAAAGACTAGAGATTGTTTTAGAAGCTCTTGATGACTTAAAAGGTATTAATATTCAAACTATAGATGTAGAACATC
TCACAGATATGATGGATAAGATTGTAATATCTACAGCATCATCAACAACTCATGCAAAAGCTTTAGCAAAAAATTTAGAA
CAAGAATTAAAAAACAATGAAATTACTATACTTGGTATCGAAGGTGACAATAAATCTGATTGGGTTTTAGTTGATATCGG
TGATATTGTTGTGCATATCATGCTTGAAGCAACTAGAGATCTATATGCGCTAGAAAAACTATGGGATATCAAACGCATAG
ATAACTAA

Upstream 100 bases:

>100_bases
AAAAAAGCACTAAAACTATCGCAGTCAAAATAATCAAAAATAAAAATAGAAACAAACTCTTTTTCTTCATCTTTTACCTC
TAAAGCCTTTTGTTTATATA

Downstream 100 bases:

>100_bases
TTATGAAGCTCGAGCTTTCTCTAGAACAATGGCAACAGGTAAAAGATTTTGCCATAAGAAATCTTAATCTATCATCAATT
TCGAAAGTTGATTGTGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MISSFRLTYVIILIQIYKTLIFNFMTTDQRLEIVLEALDDLKGINIQTIDVEHLTDMMDKIVISTASSTTHAKALAKNLE
QELKNNEITILGIEGDNKSDWVLVDIGDIVVHIMLEATRDLYALEKLWDIKRIDN

Sequences:

>Translated_135_residues
MISSFRLTYVIILIQIYKTLIFNFMTTDQRLEIVLEALDDLKGINIQTIDVEHLTDMMDKIVISTASSTTHAKALAKNLE
QELKNNEITILGIEGDNKSDWVLVDIGDIVVHIMLEATRDLYALEKLWDIKRIDN
>Mature_135_residues
MISSFRLTYVIILIQIYKTLIFNFMTTDQRLEIVLEALDDLKGINIQTIDVEHLTDMMDKIVISTASSTTHAKALAKNLE
QELKNNEITILGIEGDNKSDWVLVDIGDIVVHIMLEATRDLYALEKLWDIKRIDN

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=97, Percent_Identity=41.2371134020619, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 15477; Mature: 15477

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSFRLTYVIILIQIYKTLIFNFMTTDQRLEIVLEALDDLKGINIQTIDVEHLTDMMDK
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
IVISTASSTTHAKALAKNLEQELKNNEITILGIEGDNKSDWVLVDIGDIVVHIMLEATRD
HHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHH
LYALEKLWDIKRIDN
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MISSFRLTYVIILIQIYKTLIFNFMTTDQRLEIVLEALDDLKGINIQTIDVEHLTDMMDK
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
IVISTASSTTHAKALAKNLEQELKNNEITILGIEGDNKSDWVLVDIGDIVVHIMLEATRD
HHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHH
LYALEKLWDIKRIDN
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]