Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yihQ [H]
Identifier: 89256390
GI number: 89256390
Start: 1008728
End: 1008973
Strand: Reverse
Name: yihQ [H]
Synonym: FTL_1052
Alternate gene names: 89256390
Gene position: 1008973-1008728 (Counterclockwise)
Preceding gene: 89256391
Following gene: 89256384
Centisome position: 53.22
GC content: 31.71
Gene sequence:
>246_bases ATGTTATTTCAGTATCAATATTTGCTAGGTGAAGATCTTTTATTAGCTCCTGTACATCAACAAGGTGTTACAGAATGGGA TGTATATCTGCCAAAAGGTGATGATTGGATACATATATACTCAAATAAAGAATACAAAGGTGGACAAACTATAACTGTGA AAGCAGAAATTGGCTATCCTCCCGTATTCTATAAAAAAGGGACTTATCATAGTAAGCTCTTTAATTCCCTTAAAGATATT AAATAA
Upstream 100 bases:
>100_bases CTACCCTTAAGCCTTATATAAAATCATTAGTAAATGAAAACCATCAAAAAGGCATACCAGTACAAAGACCTTTATTTATT CACTATGAAAATGATCCTCT
Downstream 100 bases:
>100_bases ATCTTATCATTACATAGATAATTTGCTGGTTAAAAAATGGTCTATAATTTATTTAAGGGCTCTCGACTTTAAAAGAATCC AGAAGTTTTACACAATTAAG
Product: putative glycosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLFQYQYLLGEDLLLAPVHQQGVTEWDVYLPKGDDWIHIYSNKEYKGGQTITVKAEIGYPPVFYKKGTYHSKLFNSLKDI K
Sequences:
>Translated_81_residues MLFQYQYLLGEDLLLAPVHQQGVTEWDVYLPKGDDWIHIYSNKEYKGGQTITVKAEIGYPPVFYKKGTYHSKLFNSLKDI K >Mature_81_residues MLFQYQYLLGEDLLLAPVHQQGVTEWDVYLPKGDDWIHIYSNKEYKGGQTITVKAEIGYPPVFYKKGTYHSKLFNSLKDI K
Specific function: Exhibits hydrolysis activity against alpha-glucosyl fluoride, although natural substrates, such as alpha-glucobioses are scarcely hydrolyzed [H]
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Escherichia coli, GI2367323, Length=78, Percent_Identity=48.7179487179487, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 9470; Mature: 9470
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQYQYLLGEDLLLAPVHQQGVTEWDVYLPKGDDWIHIYSNKEYKGGQTITVKAEIGYP CEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCC PVFYKKGTYHSKLFNSLKDIK CEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MLFQYQYLLGEDLLLAPVHQQGVTEWDVYLPKGDDWIHIYSNKEYKGGQTITVKAEIGYP CEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCC PVFYKKGTYHSKLFNSLKDIK CEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]