Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is blaA [H]
Identifier: 89256237
GI number: 89256237
Start: 857325
End: 858188
Strand: Reverse
Name: blaA [H]
Synonym: FTL_0879
Alternate gene names: 89256237
Gene position: 858188-857325 (Counterclockwise)
Preceding gene: 89256239
Following gene: 89256228
Centisome position: 45.26
GC content: 29.17
Gene sequence:
>864_bases ATGCGTCTATTAGTTACAACTTTATCATTAATCCCGAGTATCATACTAGCTGCTCCTCAATTAGATGATTCTTTTAAAAA TCTGGAAAACAAATATGATGGAAAAATTGGCATCTACACTCTCAACACTGATGATAAAACTAACATCAAATATAACGAAA GCTATCACTTCCCTATTTGTAGTGTTTTCAAGTTTTTATTAGTTGGTGCAATTTTAGATTATGATATGCATAATCAAGGC TTCTTAGATAAAAAAATTCCAATAAATCAAGATGATATTGGTAAACTCGGATATGCTCCTATTACTGCTAAAAACGTTGG TAAAACTCTAACAATATCACAACTTAACTACGCTGCTATCCTAAGTGATAGTCCTGCCAGTAACATATTAGTTAGAGAAC TTGGAGGTTTACAAAACTTAAATAAATTTATAAAAAAATTAGGTGATAACGATACTATAATTACTGCTGATGAACCAGAA ATTAATTATACTCAGCCACATAGTAATATAAATAAAATAACTCCAAAGGCTATTACTAAAGATATTTATAAATTAGCATT TGGCAATATTCTAGATAAAAAACATAAAGATATTTTTATAAAGTATCTACAAGATAATAATACTGGTGCAAATAGAATAG CTTTTGGCATGCCTAAAGATTGGATAATTGGCGATAAAACTGGAACTTGTGGTCAATATGCAGCAACTAATGATGTAGCT ATTATATGGCCTAAAAATCAGCAACCTATTGCGTTAGGAATTTTATATACTAACCCTAATGATAAAAATGCACCAAGTAA TGAAGAAATTATTCAACAAGCAGCTAAATTAATAGCTAATGATCTGACTAACACTTATAAATAA
Upstream 100 bases:
>100_bases AATGCTTCTTAGAAAAAATTAAAATATCTAGAAACTTTTCATATAGCAATTTCTTATATAAACTCTACTTATTGTTTGTT TAGCTACAAAGGCTTAAATA
Downstream 100 bases:
>100_bases GCGGTACGCCACATTGAGGAGACGCTATTTATCACAGCATCTCTATTTGAAATATTAGTCAAAAAATGCAATCCGGTACA TTGCTCAATATCTTTTATAG
Product: beta-lactamase
Products: NA
Alternate protein names: Penicillinase [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRLLVTTLSLIPSIILAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNIKYNESYHFPICSVFKFLLVGAILDYDMHNQG FLDKKIPINQDDIGKLGYAPITAKNVGKTLTISQLNYAAILSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPE INYTQPHSNINKITPKAITKDIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFGMPKDWIIGDKTGTCGQYAATNDVA IIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLTNTYK
Sequences:
>Translated_287_residues MRLLVTTLSLIPSIILAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNIKYNESYHFPICSVFKFLLVGAILDYDMHNQG FLDKKIPINQDDIGKLGYAPITAKNVGKTLTISQLNYAAILSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPE INYTQPHSNINKITPKAITKDIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFGMPKDWIIGDKTGTCGQYAATNDVA IIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLTNTYK >Mature_287_residues MRLLVTTLSLIPSIILAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNIKYNESYHFPICSVFKFLLVGAILDYDMHNQG FLDKKIPINQDDIGKLGYAPITAKNVGKTLTISQLNYAAILSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPE INYTQPHSNINKITPKAITKDIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFGMPKDWIIGDKTGTCGQYAATNDVA IIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLTNTYK
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31965; Mature: 31965
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVTTLSLIPSIILAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNIKYNESYHFPIC CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCHH SVFKFLLVGAILDYDMHNQGFLDKKIPINQDDIGKLGYAPITAKNVGKTLTISQLNYAAI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCEEEEECCCEEEE LSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPEINYTQPHSNINKITPKAITK ECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCHHHHHH DIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFGMPKDWIIGDKTGTCGQYAATNDVA HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCEE IIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLTNTYK EEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLLVTTLSLIPSIILAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNIKYNESYHFPIC CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCHH SVFKFLLVGAILDYDMHNQGFLDKKIPINQDDIGKLGYAPITAKNVGKTLTISQLNYAAI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCEEEEECCCEEEE LSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPEINYTQPHSNINKITPKAITK ECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCHHHHHH DIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFGMPKDWIIGDKTGTCGQYAATNDVA HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCEE IIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLTNTYK EEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1886608 [H]