| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256232
Identifier: 89256232
GI number: 89256232
Start: 851082
End: 851582
Strand: Direct
Name: 89256232
Synonym: FTL_0872
Alternate gene names: NA
Gene position: 851082-851582 (Clockwise)
Preceding gene: 89256231
Following gene: 89256233
Centisome position: 44.89
GC content: 29.34
Gene sequence:
>501_bases GTGTGTCTATTAATAGGAGCAATCATTTCACCAACTGATCCAGTCACATTATTGAAGTTCTTAAATCTAACAAAAATATG CCAGAAAAGATTAAAAATATTACTCGAAGGAGATTCATTATTTAATGATGTAGTTTCGATTGTTCTATTTACAATGTTCG TTGGAATTATTGATGGAAATTCTCAAGATGTCTCAATATTTAGTATTTCAGAATTGTTACTAAGAGAGGGACTTAGAGGT ATATTATTAGGCTCAGTAATAGGCTACGCTAGCTCGTTTTTGATGAAAAGTCTTGATGATAGTAATGCTTTGGTTTTAGT ATTCTCTAAAGATACTTATGTTATGACATGGGCAGGTTTAAGAGGAGGTGTGTCAATTGCATTATCTTTACCTGAGGATA GTTCAAGTATGTTTATATTTTTAGTCATATATGTATATGTGATAACTTCAATATTTATTAAAGGGATATCTTTGAAAAGA TATATTGAATTTTTGTTATAA
Upstream 100 bases:
>100_bases TATCTCTTTCCACAATAGGCGTGTTAGTTTCAACATTTATGGTTGCAAACATCAGTTGGATTATTACCAATAGTATATTA GGTATAAATATTTCTTTCTA
Downstream 100 bases:
>100_bases GTAAAGAAAGAATTTAAAACCAACTAGGCTGGATTAGCTATATCTATAAATTTTGTCTCAAGATTAAATTTTTGTTTAAG TAATTCAGCAATAGCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MCLLIGAIISPTDPVTLLKFLNLTKICQKRLKILLEGDSLFNDVVSIVLFTMFVGIIDGNSQDVSIFSISELLLREGLRG ILLGSVIGYASSFLMKSLDDSNALVLVFSKDTYVMTWAGLRGGVSIALSLPEDSSSMFIFLVIYVYVITSIFIKGISLKR YIEFLL
Sequences:
>Translated_166_residues MCLLIGAIISPTDPVTLLKFLNLTKICQKRLKILLEGDSLFNDVVSIVLFTMFVGIIDGNSQDVSIFSISELLLREGLRG ILLGSVIGYASSFLMKSLDDSNALVLVFSKDTYVMTWAGLRGGVSIALSLPEDSSSMFIFLVIYVYVITSIFIKGISLKR YIEFLL >Mature_166_residues MCLLIGAIISPTDPVTLLKFLNLTKICQKRLKILLEGDSLFNDVVSIVLFTMFVGIIDGNSQDVSIFSISELLLREGLRG ILLGSVIGYASSFLMKSLDDSNALVLVFSKDTYVMTWAGLRGGVSIALSLPEDSSSMFIFLVIYVYVITSIFIKGISLKR YIEFLL
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18302; Mature: 18302
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLLIGAIISPTDPVTLLKFLNLTKICQKRLKILLEGDSLFNDVVSIVLFTMFVGIIDGN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCC SQDVSIFSISELLLREGLRGILLGSVIGYASSFLMKSLDDSNALVLVFSKDTYVMTWAGL CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCC RGGVSIALSLPEDSSSMFIFLVIYVYVITSIFIKGISLKRYIEFLL CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC >Mature Secondary Structure MCLLIGAIISPTDPVTLLKFLNLTKICQKRLKILLEGDSLFNDVVSIVLFTMFVGIIDGN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCC SQDVSIFSISELLLREGLRGILLGSVIGYASSFLMKSLDDSNALVLVFSKDTYVMTWAGL CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCC RGGVSIALSLPEDSSSMFIFLVIYVYVITSIFIKGISLKRYIEFLL CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA