| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is can [H]
Identifier: 89256216
GI number: 89256216
Start: 836941
End: 837627
Strand: Direct
Name: can [H]
Synonym: FTL_0856
Alternate gene names: 89256216
Gene position: 836941-837627 (Clockwise)
Preceding gene: 89256215
Following gene: 89256221
Centisome position: 44.14
GC content: 34.93
Gene sequence:
>687_bases ATGAGTGATATTTCTGAGTTGATAAAAGGCAATAGAGCATGGGCTGAAGAGATCAAAAAAACAAATCCAGGTTTTTTTGA AACTTTATCTAAAGGTCAGTCTCCAGAATACCTTTGGATAGGTTGTTCAGATAGTCGAGTACCTGCAAACCAAATTTGTG GTTTGATTCCAGGTGAGGTTTTTGTCCATCGTAATGTTGCAAACGTTGTTTCACTTACAGATTTAAACTGTTTGTCAGTG TTACAGTTTGCTATTGAAGTCTTAAAGATTAAGAAAATAATAGTATGTGGTCACTATGCTTGTGGTGGTGTTGAGACTGT TGTCAAAGATAAGAGCTATGGTCTAATTGATAACTGGCTAACGTCTATCCATGAAGTTAAAGAGCAAAACAAACAGTTTA TTGAAGAGTCATTATCTTGTTACAAAGATAATCAAGAAGAATATATGAAGAAAAAAGTAGATATGATGTGTGAGCTAAAT GCACTTCATCAAGCACTAAATCTTTGTAAAACTACAGTTGTTAAAAATGCGTGGGCAAAAGGGCTTACCTTTACTATACA TGCAGCTATATACGGTATTGGCGATGGTAAGCTTTATGAAATTGGTGGTGGTGTAGGCTCAAGAGCAGAGATGGATACTA CTTATGCTCAAGCTATTAAAGACATCAAATCTAGATATTGTAGATAA
Upstream 100 bases:
>100_bases GTTTCATTACAAGGCGAAGTAACGATATAACTTAAATATAAATAGTAAAAAGCTTATACGTATAGCTAGCTAATACTAAT AATAATTTCAAGGAGATAAA
Downstream 100 bases:
>100_bases TCTAATTCTGTTGATTTTTTATATTTGTCAAAATAACTTATATTATATAAGTAATATATGACTATAAACATATAAATTCA TAAATGAATGAAATTATAGT
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSDISELIKGNRAWAEEIKKTNPGFFETLSKGQSPEYLWIGCSDSRVPANQICGLIPGEVFVHRNVANVVSLTDLNCLSV LQFAIEVLKIKKIIVCGHYACGGVETVVKDKSYGLIDNWLTSIHEVKEQNKQFIEESLSCYKDNQEEYMKKKVDMMCELN ALHQALNLCKTTVVKNAWAKGLTFTIHAAIYGIGDGKLYEIGGGVGSRAEMDTTYAQAIKDIKSRYCR
Sequences:
>Translated_228_residues MSDISELIKGNRAWAEEIKKTNPGFFETLSKGQSPEYLWIGCSDSRVPANQICGLIPGEVFVHRNVANVVSLTDLNCLSV LQFAIEVLKIKKIIVCGHYACGGVETVVKDKSYGLIDNWLTSIHEVKEQNKQFIEESLSCYKDNQEEYMKKKVDMMCELN ALHQALNLCKTTVVKNAWAKGLTFTIHAAIYGIGDGKLYEIGGGVGSRAEMDTTYAQAIKDIKSRYCR >Mature_227_residues SDISELIKGNRAWAEEIKKTNPGFFETLSKGQSPEYLWIGCSDSRVPANQICGLIPGEVFVHRNVANVVSLTDLNCLSVL QFAIEVLKIKKIIVCGHYACGGVETVVKDKSYGLIDNWLTSIHEVKEQNKQFIEESLSCYKDNQEEYMKKKVDMMCELNA LHQALNLCKTTVVKNAWAKGLTFTIHAAIYGIGDGKLYEIGGGVGSRAEMDTTYAQAIKDIKSRYCR
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=227, Percent_Identity=42.7312775330396, Blast_Score=214, Evalue=4e-57, Organism=Escherichia coli, GI1786534, Length=204, Percent_Identity=25, Blast_Score=72, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324292, Length=203, Percent_Identity=30.0492610837438, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 25439; Mature: 25307
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDISELIKGNRAWAEEIKKTNPGFFETLSKGQSPEYLWIGCSDSRVPANQICGLIPGEV CCCHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCHH FVHRNVANVVSLTDLNCLSVLQFAIEVLKIKKIIVCGHYACGGVETVVKDKSYGLIDNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCHHHHHH TSIHEVKEQNKQFIEESLSCYKDNQEEYMKKKVDMMCELNALHQALNLCKTTVVKNAWAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTFTIHAAIYGIGDGKLYEIGGGVGSRAEMDTTYAQAIKDIKSRYCR CCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDISELIKGNRAWAEEIKKTNPGFFETLSKGQSPEYLWIGCSDSRVPANQICGLIPGEV CCHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCHH FVHRNVANVVSLTDLNCLSVLQFAIEVLKIKKIIVCGHYACGGVETVVKDKSYGLIDNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCHHHHHH TSIHEVKEQNKQFIEESLSCYKDNQEEYMKKKVDMMCELNALHQALNLCKTTVVKNAWAK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTFTIHAAIYGIGDGKLYEIGGGVGSRAEMDTTYAQAIKDIKSRYCR CCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]