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The map label for this gene is secF [H]

Identifier: 89256209

GI number: 89256209

Start: 831029

End: 831973

Strand: Direct

Name: secF [H]

Synonym: FTL_0849

Alternate gene names: 89256209

Gene position: 831029-831973 (Clockwise)

Preceding gene: 89256208

Following gene: 89256210

Centisome position: 43.83

GC content: 32.8

Gene sequence:

>945_bases
ATGGAATTTTTTAAACAAAAGACAAGCATAGATTTTTTAGGAATTAAGAAATATACAACTGTTTTTTCTGTATTAATGAT
TGTTGTGTCATTATTTTTTATCTTTACTAAAGGTTTAAATCTTGGCTTAGACTTCACAGGTGGTTATCAAGTACAAATTC
AGACATCTACTAAGTCACAAGATTCTGAAACTATGACTAAAGAGTTAGCCAAAGCTGGTTTTGAACATACAACTATTACT
ACTTTTGGTGATAATAATAACTTTCTCATTAAGTTTGCTCCTGATGAGGTTAACACAAAAGCAAAAAGCTTAGAAGATGC
ACAACAATATCTCAAGCAGCAAGTCGAAAACTCGTTAGATGCGCAAGTTCAAAGTGTTAATTATATTGGTCCACAGGTTG
GTAAAGAGTTAGCAAGTAATGGTGTTTTAGCAATTATAGTAGCGATGGTATGTATTTTGATATATATCAGTGCTAGATTT
GAGATGAAGTTCGGTATTAGTGCTTGTATTGCATTACTTCATGATCCTATAGTTATCTTAGGCATATTTTCGGCATTTCA
GTTAGAGTTTGATTTAACTGTATTAGCTGCGGTACTAGCTGTGATTGGCTACTCATTAAATGATACCGTTGTAATATATG
ATAGAGTGCGTGAGAACTTCAGAAAAATGCGTAATGCTAGTGTTGTAGAAGTTGTTAATAGAAGTATTAATGATACTTTA
TCAAGAACTATTTTGACTTCTGGTCTAACAATGCTAGTTGTTGTAGTGCTATATTTGTTTGGTGGTAGTTCAGTACATAA
TTTCTCATTGGCTCTAATCTTAGGAATAGTGGTGGGTACATACTCATCTATATACGTTGCTGGTGTGGTAGCTGTTGCGC
TAGGTTTAAATAGAGAATCATTACTTCCGAAGCAAGTATCTAAAGAAGATATTCCTATTCTATAA

Upstream 100 bases:

>100_bases
ATCTGTTACTGTTTCAAGAGCGATGACAAATTTTGTTTACGGTAAGAGAAAGAAACTAGAAAAAATCTCTATAGGCATAT
AATTTTAGGTTGGGTTTATA

Downstream 100 bases:

>100_bases
ATAAATCTTTATTATGGTTGCTAACCATTAAATGGTGTATAATTATAATGAAGAATTAATAAAAGGAGCATTAATGAAAA
AATTAGTTTTAGTAGCTTGT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MEFFKQKTSIDFLGIKKYTTVFSVLMIVVSLFFIFTKGLNLGLDFTGGYQVQIQTSTKSQDSETMTKELAKAGFEHTTIT
TFGDNNNFLIKFAPDEVNTKAKSLEDAQQYLKQQVENSLDAQVQSVNYIGPQVGKELASNGVLAIIVAMVCILIYISARF
EMKFGISACIALLHDPIVILGIFSAFQLEFDLTVLAAVLAVIGYSLNDTVVIYDRVRENFRKMRNASVVEVVNRSINDTL
SRTILTSGLTMLVVVVLYLFGGSSVHNFSLALILGIVVGTYSSIYVAGVVAVALGLNRESLLPKQVSKEDIPIL

Sequences:

>Translated_314_residues
MEFFKQKTSIDFLGIKKYTTVFSVLMIVVSLFFIFTKGLNLGLDFTGGYQVQIQTSTKSQDSETMTKELAKAGFEHTTIT
TFGDNNNFLIKFAPDEVNTKAKSLEDAQQYLKQQVENSLDAQVQSVNYIGPQVGKELASNGVLAIIVAMVCILIYISARF
EMKFGISACIALLHDPIVILGIFSAFQLEFDLTVLAAVLAVIGYSLNDTVVIYDRVRENFRKMRNASVVEVVNRSINDTL
SRTILTSGLTMLVVVVLYLFGGSSVHNFSLALILGIVVGTYSSIYVAGVVAVALGLNRESLLPKQVSKEDIPIL
>Mature_314_residues
MEFFKQKTSIDFLGIKKYTTVFSVLMIVVSLFFIFTKGLNLGLDFTGGYQVQIQTSTKSQDSETMTKELAKAGFEHTTIT
TFGDNNNFLIKFAPDEVNTKAKSLEDAQQYLKQQVENSLDAQVQSVNYIGPQVGKELASNGVLAIIVAMVCILIYISARF
EMKFGISACIALLHDPIVILGIFSAFQLEFDLTVLAAVLAVIGYSLNDTVVIYDRVRENFRKMRNASVVEVVNRSINDTL
SRTILTSGLTMLVVVVLYLFGGSSVHNFSLALILGIVVGTYSSIYVAGVVAVALGLNRESLLPKQVSKEDIPIL

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=300, Percent_Identity=41, Blast_Score=251, Evalue=6e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34485; Mature: 34485

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFKQKTSIDFLGIKKYTTVFSVLMIVVSLFFIFTKGLNLGLDFTGGYQVQIQTSTKSQ
CCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCC
DSETMTKELAKAGFEHTTITTFGDNNNFLIKFAPDEVNTKAKSLEDAQQYLKQQVENSLD
CHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHH
AQVQSVNYIGPQVGKELASNGVLAIIVAMVCILIYISARFEMKFGISACIALLHDPIVIL
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
GIFSAFQLEFDLTVLAAVLAVIGYSLNDTVVIYDRVRENFRKMRNASVVEVVNRSINDTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRTILTSGLTMLVVVVLYLFGGSSVHNFSLALILGIVVGTYSSIYVAGVVAVALGLNRES
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLPKQVSKEDIPIL
CCHHHCCCCCCCCC
>Mature Secondary Structure
MEFFKQKTSIDFLGIKKYTTVFSVLMIVVSLFFIFTKGLNLGLDFTGGYQVQIQTSTKSQ
CCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCC
DSETMTKELAKAGFEHTTITTFGDNNNFLIKFAPDEVNTKAKSLEDAQQYLKQQVENSLD
CHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHH
AQVQSVNYIGPQVGKELASNGVLAIIVAMVCILIYISARFEMKFGISACIALLHDPIVIL
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
GIFSAFQLEFDLTVLAAVLAVIGYSLNDTVVIYDRVRENFRKMRNASVVEVVNRSINDTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRTILTSGLTMLVVVVLYLFGGSSVHNFSLALILGIVVGTYSSIYVAGVVAVALGLNRES
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLPKQVSKEDIPIL
CCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]