| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is coaBC [H]
Identifier: 89256178
GI number: 89256178
Start: 796228
End: 797403
Strand: Direct
Name: coaBC [H]
Synonym: FTL_0808
Alternate gene names: 89256178
Gene position: 796228-797403 (Clockwise)
Preceding gene: 89256177
Following gene: 89256183
Centisome position: 42.0
GC content: 28.91
Gene sequence:
>1176_bases ATGAGTAATAAGATTTTATTTGGGATCACTGGCAGTATATCAGCTTTTAAAACTATAAATTTGATAAGACTTTTTATTAA AAGTGGTGTTGAATGTAGAGCTATAGTTACTAAAGGTGCACAGCAGTTTATAAAGCCTGAACTTTTAGTAGCTTTAGGCT GTGATGTTTATACTGATGAAAAACTAGATATGTTATCTTATCAGCAAAGTATGGCACATATAAATTTATCACGTTGGGCT GATAAGATATTTATAGTTCCTGCTTCAGCAAATACTATTGCAAAATTAGCTTATGGTTTAGCAGATGATTTATTAAGTCA AACAATATTAGCTAATGATGATAATTCTAAGGTATATATAGCTCCTGCTATGAATGTAAATATGTGGCAAAACCAACTTA CTCAAGATAATATTAATAAACTTCAAACTTTAGGATTTAATTTGATATTACCTGATAAAGGTCTTCAAGCTTGTGGAGAT ATTGGTAGTGGTAGATTACATGAGCCGGAAGTCTTGTTTGATTTATTGAGTGTTTCTCAAGATTTCAAAGCTAAAAAAGT AGTGATAACAGTAGGAGCAACTGTAGAAGATATTGATGGTGTTAGATATTTATCAAATTATAGCTCTGGTAAAATGGGCT TTGCTTTGGTAAGAGAGTTACTTGCAAGAGGAGCTAGTGTTGTAGTATTAAAAGCAAAAACTACAATAAGCTTTGATATT AAACATCCTAATTTAGAAATTATTAATACCAAAAGTGCTGATGATATGAACCAAGCAATGCTTAAAAAAGCTAAAGATAG TGATATTTTTATAGGCTGTGCTGCAGTTGCTGATTATAAGATCAAAAATAAATTTACTAATAAAATTAAAAAAACTGATG ATACATTAACTTTAGAGTTTATAAAAAATCCTGATGTTTTAGCTAATTGTAAAAAAACATACCCAAATATCTTTGCTATA GGTTTTGCAGCAGAATCACAAAATATAGTAGATTATGCTCAGGCTAAACTTGTCAAAAAGAATCTAAATATGGTAGTTGC AAATTCAACTGAAGTATTTGGTAATGATAACTCAAGTGTAACAATATTATCTAAGCATCAAACTAAACAATATAACAATA AATCAAAGTCAGAAATAGCTAAGTTAATATTAGATTTTGCTAAGGAAATAATATGA
Upstream 100 bases:
>100_bases GAATGTGAATATCTTAGCTGTAGTAGTTGCTATTATGGTCTTACTAATAATCATGTTTTATAAAAGAGAGAAGATATTAA ATAAATAGAGATTAATATTT
Downstream 100 bases:
>100_bases GTGTTAGAGAAGTTTGTATAGCTGGTAAATGTAATAAGCTGATAACTTTAAAAAATGATAATATTGAATTGATACTTTTG AATCAAGGAGCAACTGTTTT
Product: bifunctional 4'-phosphopantothenoylcysteine decarboxylase,phosphopantothenoylcysteine synthetase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSNKILFGITGSISAFKTINLIRLFIKSGVECRAIVTKGAQQFIKPELLVALGCDVYTDEKLDMLSYQQSMAHINLSRWA DKIFIVPASANTIAKLAYGLADDLLSQTILANDDNSKVYIAPAMNVNMWQNQLTQDNINKLQTLGFNLILPDKGLQACGD IGSGRLHEPEVLFDLLSVSQDFKAKKVVITVGATVEDIDGVRYLSNYSSGKMGFALVRELLARGASVVVLKAKTTISFDI KHPNLEIINTKSADDMNQAMLKKAKDSDIFIGCAAVADYKIKNKFTNKIKKTDDTLTLEFIKNPDVLANCKKTYPNIFAI GFAAESQNIVDYAQAKLVKKNLNMVVANSTEVFGNDNSSVTILSKHQTKQYNNKSKSEIAKLILDFAKEII
Sequences:
>Translated_391_residues MSNKILFGITGSISAFKTINLIRLFIKSGVECRAIVTKGAQQFIKPELLVALGCDVYTDEKLDMLSYQQSMAHINLSRWA DKIFIVPASANTIAKLAYGLADDLLSQTILANDDNSKVYIAPAMNVNMWQNQLTQDNINKLQTLGFNLILPDKGLQACGD IGSGRLHEPEVLFDLLSVSQDFKAKKVVITVGATVEDIDGVRYLSNYSSGKMGFALVRELLARGASVVVLKAKTTISFDI KHPNLEIINTKSADDMNQAMLKKAKDSDIFIGCAAVADYKIKNKFTNKIKKTDDTLTLEFIKNPDVLANCKKTYPNIFAI GFAAESQNIVDYAQAKLVKKNLNMVVANSTEVFGNDNSSVTILSKHQTKQYNNKSKSEIAKLILDFAKEII >Mature_390_residues SNKILFGITGSISAFKTINLIRLFIKSGVECRAIVTKGAQQFIKPELLVALGCDVYTDEKLDMLSYQQSMAHINLSRWAD KIFIVPASANTIAKLAYGLADDLLSQTILANDDNSKVYIAPAMNVNMWQNQLTQDNINKLQTLGFNLILPDKGLQACGDI GSGRLHEPEVLFDLLSVSQDFKAKKVVITVGATVEDIDGVRYLSNYSSGKMGFALVRELLARGASVVVLKAKTTISFDIK HPNLEIINTKSADDMNQAMLKKAKDSDIFIGCAAVADYKIKNKFTNKIKKTDDTLTLEFIKNPDVLANCKKTYPNIFAIG FAAESQNIVDYAQAKLVKKNLNMVVANSTEVFGNDNSSVTILSKHQTKQYNNKSKSEIAKLILDFAKEII
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=179, Percent_Identity=32.9608938547486, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI87082301, Length=396, Percent_Identity=36.6161616161616, Blast_Score=244, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17560194, Length=171, Percent_Identity=35.0877192982456, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322762, Length=179, Percent_Identity=32.4022346368715, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24657262, Length=186, Percent_Identity=29.0322580645161, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43093; Mature: 42962
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKILFGITGSISAFKTINLIRLFIKSGVECRAIVTKGAQQFIKPELLVALGCDVYTDE CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCCC KLDMLSYQQSMAHINLSRWADKIFIVPASANTIAKLAYGLADDLLSQTILANDDNSKVYI CHHHHHHHHHHHHEEHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEE APAMNVNMWQNQLTQDNINKLQTLGFNLILPDKGLQACGDIGSGRLHEPEVLFDLLSVSQ EECCCCHHHHHHCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHCCC DFKAKKVVITVGATVEDIDGVRYLSNYSSGKMGFALVRELLARGASVVVLKAKTTISFDI CCCCEEEEEEECCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEEE KHPNLEIINTKSADDMNQAMLKKAKDSDIFIGCAAVADYKIKNKFTNKIKKTDDTLTLEF ECCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHCCCCEEEEEE IKNPDVLANCKKTYPNIFAIGFAAESQNIVDYAQAKLVKKNLNMVVANSTEVFGNDNSSV ECCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCCCEE TILSKHQTKQYNNKSKSEIAKLILDFAKEII EEEECCCHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SNKILFGITGSISAFKTINLIRLFIKSGVECRAIVTKGAQQFIKPELLVALGCDVYTDE CCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCCC KLDMLSYQQSMAHINLSRWADKIFIVPASANTIAKLAYGLADDLLSQTILANDDNSKVYI CHHHHHHHHHHHHEEHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEE APAMNVNMWQNQLTQDNINKLQTLGFNLILPDKGLQACGDIGSGRLHEPEVLFDLLSVSQ EECCCCHHHHHHCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHCCC DFKAKKVVITVGATVEDIDGVRYLSNYSSGKMGFALVRELLARGASVVVLKAKTTISFDI CCCCEEEEEEECCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEEE KHPNLEIINTKSADDMNQAMLKKAKDSDIFIGCAAVADYKIKNKFTNKIKKTDDTLTLEF ECCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHCCCCEEEEEE IKNPDVLANCKKTYPNIFAIGFAAESQNIVDYAQAKLVKKNLNMVVANSTEVFGNDNSSV ECCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCCCEE TILSKHQTKQYNNKSKSEIAKLILDFAKEII EEEECCCHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]