Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is ypdP [H]
Identifier: 89256120
GI number: 89256120
Start: 720887
End: 721600
Strand: Reverse
Name: ypdP [H]
Synonym: FTL_0731
Alternate gene names: 89256120
Gene position: 721600-720887 (Counterclockwise)
Preceding gene: 89256123
Following gene: 89256113
Centisome position: 38.06
GC content: 28.43
Gene sequence:
>714_bases ATGACTAATTTTAAACTTTTAATATTATTCACACTCATTGATTTTTCAATTCTATTTTTATCTTTCAAGCTTTTTGGTAA AAAAGGAATTTATATATTTATTGTTATAAGTGTAATAGCAGCAAACATCCAAGTTAATAAAGGTGTTGCTTATGATATTG CAGGATTTCATATTATTGCAACATTAGGTAATGTAATGTTTGGAGGTATTTTTACCGCTAATGATTTACTCAATGAGAAA TATGGACTACAAGAGGCGCGAAAAGCTGTATTAAAGTCAATATTTTTTGGCATATCATTTATGATTTTTATGTTTATCTC AACATTATTTACTAGTTTGAATGATCCTTTCTATAATGATACTAAAAAAGCTCTTAATTTATTTTTCTCTATCGATGGTG GAGCTTTGAAAGCTGTGATTATCGGTAATATGGTATACCTGATATCTCAACTTTTTGATGTGCTTATTTACTCGAAAATA AAAAGCTATAGTTCTGATATAAAATGGTTATGGTTAAGAAATACTGGCTCAACTTTAATATCACAAATACTTGATACAAC GCTTATTACTTACGGATTTGGCTTTGCTGGAGTTTTACCACTTGATTATGCTTTTGAAATAATCATCTCAACTTTAGTAA TAAAATATACTGTGGCCTTGATAAATGCACCGCTGTTTTACATACTAGCATTTACTAAGCCTAGAGAAGTATAA
Upstream 100 bases:
>100_bases AAAATTTATTTGTTATTGATAAACTATTTTGTTATATTATAGCAGATTTTTAATCCCCTGTTCGCAACTATCCAGGGTTA ACAAAACTATAGGAAAGCAA
Downstream 100 bases:
>100_bases ACTAAACAATTATTAAAACTCATAAGCTAATGTTTATCCAAGTACCCATCTACTAAAATACTTACTTAATAAACTACTAT ATCTTACTACTACAAAATGT
Product: YhhQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTNFKLLILFTLIDFSILFLSFKLFGKKGIYIFIVISVIAANIQVNKGVAYDIAGFHIIATLGNVMFGGIFTANDLLNEK YGLQEARKAVLKSIFFGISFMIFMFISTLFTSLNDPFYNDTKKALNLFFSIDGGALKAVIIGNMVYLISQLFDVLIYSKI KSYSSDIKWLWLRNTGSTLISQILDTTLITYGFGFAGVLPLDYAFEIIISTLVIKYTVALINAPLFYILAFTKPREV
Sequences:
>Translated_237_residues MTNFKLLILFTLIDFSILFLSFKLFGKKGIYIFIVISVIAANIQVNKGVAYDIAGFHIIATLGNVMFGGIFTANDLLNEK YGLQEARKAVLKSIFFGISFMIFMFISTLFTSLNDPFYNDTKKALNLFFSIDGGALKAVIIGNMVYLISQLFDVLIYSKI KSYSSDIKWLWLRNTGSTLISQILDTTLITYGFGFAGVLPLDYAFEIIISTLVIKYTVALINAPLFYILAFTKPREV >Mature_236_residues TNFKLLILFTLIDFSILFLSFKLFGKKGIYIFIVISVIAANIQVNKGVAYDIAGFHIIATLGNVMFGGIFTANDLLNEKY GLQEARKAVLKSIFFGISFMIFMFISTLFTSLNDPFYNDTKKALNLFFSIDGGALKAVIIGNMVYLISQLFDVLIYSKIK SYSSDIKWLWLRNTGSTLISQILDTTLITYGFGFAGVLPLDYAFEIIISTLVIKYTVALINAPLFYILAFTKPREV
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 26606; Mature: 26475
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFKLLILFTLIDFSILFLSFKLFGKKGIYIFIVISVIAANIQVNKGVAYDIAGFHIIA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCEEHHHHHHHHH TLGNVMFGGIFTANDLLNEKYGLQEARKAVLKSIFFGISFMIFMFISTLFTSLNDPFYND HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TKKALNLFFSIDGGALKAVIIGNMVYLISQLFDVLIYSKIKSYSSDIKWLWLRNTGSTLI HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH SQILDTTLITYGFGFAGVLPLDYAFEIIISTLVIKYTVALINAPLFYILAFTKPREV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCC >Mature Secondary Structure TNFKLLILFTLIDFSILFLSFKLFGKKGIYIFIVISVIAANIQVNKGVAYDIAGFHIIA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCEEHHHHHHHHH TLGNVMFGGIFTANDLLNEKYGLQEARKAVLKSIFFGISFMIFMFISTLFTSLNDPFYND HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TKKALNLFFSIDGGALKAVIIGNMVYLISQLFDVLIYSKIKSYSSDIKWLWLRNTGSTLI HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH SQILDTTLITYGFGFAGVLPLDYAFEIIISTLVIKYTVALINAPLFYILAFTKPREV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]