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The map label for this gene is recO [H]

Identifier: 89256109

GI number: 89256109

Start: 711334

End: 712032

Strand: Direct

Name: recO [H]

Synonym: FTL_0720

Alternate gene names: 89256109

Gene position: 711334-712032 (Clockwise)

Preceding gene: 89256108

Following gene: 89256114

Centisome position: 37.52

GC content: 28.47

Gene sequence:

>699_bases
ATGCAGCAGCTATATGATTTTTATATATTACATCAACGTAAATATAGAGAAAATTCACTACTTGTGAGTGTATTTACGCG
TGAGTTTGGCAAGCTCTCAGCATTAATAGCAATTAATAAAAAAACTACTAACTTATATCAGCCATTAGTAAAACTAAGAG
GACAAATAAACCTTGCTAAAAAAGCTGATGGTCTCAGTAAAATATATAATATTGAGTTTGTTGAGTCATTTTATCAAAAA
ACATATATAAACTTATTGTCACTGCAATATATTAATGAGCTTATATATTTACTTTTAAATTACTCTCACGAAGAAGATGT
CCTCTTTGATAAATATGATTTTATCTTAAGAAATATCGATGAAGCAAATTATAGACACTTACTAAGGATGTTTGAGCTTG
AGTTATTAAATAGTCTTGGTCAGGGTATCTATGTTGATAGTGATATTGATGGGATGTTAATACAAAATGATTGTAATTAT
ATTATACTTCCAAATGGTTTTAGAAAAGATTTCAGTTTTGCTGTCAATAGTATCTCTGGTAGTAGTCTTAAGAAAATAAA
TCAACCACTAAGCTCGTGGTCAAATGATGATTTAAAAGCAATTTCTAGAGTTACTCGTGTATGTGTTGATTATGTTTTAG
CTGGTAAGCAGTTAAAAAGTAGAAAGCTTCTAGTCGACTATTTAAATCTTAAAAAATAG

Upstream 100 bases:

>100_bases
CTAAGTCAAATTTCTTTAGAAAAACTAATAGCAGATTTTGATTTGCCACAAGTTAAGTATAGGGATGCACTACAAATAAT
TAAGCTTATTGAGAAAATAA

Downstream 100 bases:

>100_bases
ATTCTAGGCATAAGAATCATTTTTAAAGCAACAATAAATTTGTTTTAAATTAAATCAATGGATTTGCTGATTATATTAAC
GATCAAGTAATTTGTTCTTG

Product: DNA repair protein recO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MQQLYDFYILHQRKYRENSLLVSVFTREFGKLSALIAINKKTTNLYQPLVKLRGQINLAKKADGLSKIYNIEFVESFYQK
TYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYRHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNY
IILPNGFRKDFSFAVNSISGSSLKKINQPLSSWSNDDLKAISRVTRVCVDYVLAGKQLKSRKLLVDYLNLKK

Sequences:

>Translated_232_residues
MQQLYDFYILHQRKYRENSLLVSVFTREFGKLSALIAINKKTTNLYQPLVKLRGQINLAKKADGLSKIYNIEFVESFYQK
TYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYRHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNY
IILPNGFRKDFSFAVNSISGSSLKKINQPLSSWSNDDLKAISRVTRVCVDYVLAGKQLKSRKLLVDYLNLKK
>Mature_232_residues
MQQLYDFYILHQRKYRENSLLVSVFTREFGKLSALIAINKKTTNLYQPLVKLRGQINLAKKADGLSKIYNIEFVESFYQK
TYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNIDEANYRHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNY
IILPNGFRKDFSFAVNSISGSSLKKINQPLSSWSNDDLKAISRVTRVCVDYVLAGKQLKSRKLLVDYLNLKK

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=250, Percent_Identity=28, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27140; Mature: 27140

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLYDFYILHQRKYRENSLLVSVFTREFGKLSALIAINKKTTNLYQPLVKLRGQINLAK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHH
KADGLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNID
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
EANYRHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFSFAVNSISG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHCCCC
SSLKKINQPLSSWSNDDLKAISRVTRVCVDYVLAGKQLKSRKLLVDYLNLKK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQLYDFYILHQRKYRENSLLVSVFTREFGKLSALIAINKKTTNLYQPLVKLRGQINLAK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCHHH
KADGLSKIYNIEFVESFYQKTYINLLSLQYINELIYLLLNYSHEEDVLFDKYDFILRNID
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
EANYRHLLRMFELELLNSLGQGIYVDSDIDGMLIQNDCNYIILPNGFRKDFSFAVNSISG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHCCCC
SSLKKINQPLSSWSNDDLKAISRVTRVCVDYVLAGKQLKSRKLLVDYLNLKK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA