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The map label for this gene is arpC [H]

Identifier: 89256075

GI number: 89256075

Start: 672503

End: 673975

Strand: Reverse

Name: arpC [H]

Synonym: FTL_0686

Alternate gene names: 89256075

Gene position: 673975-672503 (Counterclockwise)

Preceding gene: 89256076

Following gene: 89256074

Centisome position: 35.55

GC content: 34.28

Gene sequence:

>1473_bases
ATGATACGAAATAAAATACTTCCTTTAGCGTTAATATCAGCAACCTTAATAACATCTAGCTGTAGCTTCTTTAACCCTGA
GTATGAAAGACCTAAAATCAAAGCTCCAGCTTTATGGAATAACCAAGATAAAAATATTGAAGTTACAAAAAACTGGGACC
TTACGAAAGTTGCATGGTGGAGAGAGTTTAATGACCCAGTATTAAATAATCTAATAACTACTGCCTTAAAAGATAATAAC
AAATTACAAGTTTCTATTGGTAATATCCTACAAGCTAATGCTGAGATAAATAAAGCCAACTATGGCTGGTTACCTACCGC
GAGTGTTGGTGGTGGTGGTTTTGTGGCACAGGCATTTGATGTTAACTCCAACTCAAATATCCCTCAGCTTAATAATATTG
GCACTCAAACTACCGCAGGATCTTTGGTTGGTATTATACCTAGCTATACAATCAATATCGCTAGGCAGTTTAAATTAGGT
GAGATTTCACGTCTTAGCAAAAAAATGCAAACTAACCTTAAAGATACCACAAGACTATCAATTATAAGCCAAGTTAGTGC
TGCATATTTTTCACTGATTACAGCAAAAGAGCAATTAAAATTACAAACGTTAATGGTTAATCAGCTGAACTTGATGTTTA
AGTACGCACAAAACCAACATAAACTCGGCGCCACCTCGCCAATGCTTGAAGAAGTTATTAGACAACAACTTGAGGTGCAA
AAAGGTAAAATAGCTATGATCAAAAATGACATAGTTCATTTCCAAAATACTCTCAAAATATTAATGGGAAGAAACCCTGG
TAAAATTGTCACAAGCAGAACTCTAAATGAAATTAATGCTAATATAAAAGTTCCTATAAATATGCCTTCTCAAGTTTTAG
AGAATAGACCAGATATTGGTATTGCTGAGTACAAGCTTGAAACAGCAAATGCGAATATCGGTTTAGCTAGATCACAGTTT
TTCCCAAGTATTGACCTTACTGGCACCTTTGGAAACGCTACACTTGCTCTTGGAGAACTTGCTACAATGAATGCTTGGGC
TTGGGCTGCTGAAGCTGTTGCTGCTGTACCAGTATTTAATCTAAGTATTTTAGCTGATAGTGATAAGGCTAAAGCACAGT
TTTATCAAGCATATTACGATTATATTAATACGCTACAACAAGCTTTCCAAGATGTTGATGATAGCCTTTCTGAAAGAGCT
GCTAATGCAAAAAATCTTAAAAAACAAACTATATCTTTAGAATCCACTCAAAGGCAAGAGAAAATATTCTTTAAAAAGTA
TAGTTCTGGGGCTATAAGTAAAGCACAATATACAGGTATTACATTGAATGTACTATATCAACAAATGCAAGTTAACCAAA
CTAAATTGAAATCTTTGATTAGTGTAGTTAATTTGTACCAAGCTCTTGGTAGTGGCTATAATGTTGATAATTATGTTGAT
CCTCATTATGATAACCCAGCTTTTGATAAATAG

Upstream 100 bases:

>100_bases
GCGCTTCCCAGTAAAAATAATCCTAAAAAATGATCCTAAATACCCACTCAGAGTTGGAGCAAGTGCAACAGTAAAAGTAG
ATACATTATAGGTCACAACA

Downstream 100 bases:

>100_bases
TTTGATGATTTTCTAGTTTAGTAAGGATCTCTAAAAAAATATTCTAAAATAAGCTCATGATTATGATAAAATCAGCTCCT
AAAACTGATTTATCTTAAAA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MIRNKILPLALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNWDLTKVAWWREFNDPVLNNLITTALKDNN
KLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIPQLNNIGTQTTAGSLVGIIPSYTINIARQFKLG
EISRLSKKMQTNLKDTTRLSIISQVSAAYFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQ
KGKIAMIKNDIVHFQNTLKILMGRNPGKIVTSRTLNEINANIKVPINMPSQVLENRPDIGIAEYKLETANANIGLARSQF
FPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFNLSILADSDKAKAQFYQAYYDYINTLQQAFQDVDDSLSERA
ANAKNLKKQTISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALGSGYNVDNYVD
PHYDNPAFDK

Sequences:

>Translated_490_residues
MIRNKILPLALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNWDLTKVAWWREFNDPVLNNLITTALKDNN
KLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIPQLNNIGTQTTAGSLVGIIPSYTINIARQFKLG
EISRLSKKMQTNLKDTTRLSIISQVSAAYFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQ
KGKIAMIKNDIVHFQNTLKILMGRNPGKIVTSRTLNEINANIKVPINMPSQVLENRPDIGIAEYKLETANANIGLARSQF
FPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFNLSILADSDKAKAQFYQAYYDYINTLQQAFQDVDDSLSERA
ANAKNLKKQTISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALGSGYNVDNYVD
PHYDNPAFDK
>Mature_490_residues
MIRNKILPLALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNWDLTKVAWWREFNDPVLNNLITTALKDNN
KLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFDVNSNSNIPQLNNIGTQTTAGSLVGIIPSYTINIARQFKLG
EISRLSKKMQTNLKDTTRLSIISQVSAAYFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQ
KGKIAMIKNDIVHFQNTLKILMGRNPGKIVTSRTLNEINANIKVPINMPSQVLENRPDIGIAEYKLETANANIGLARSQF
FPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFNLSILADSDKAKAQFYQAYYDYINTLQQAFQDVDDSLSERA
ANAKNLKKQTISLESTQRQEKIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALGSGYNVDNYVD
PHYDNPAFDK

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=484, Percent_Identity=25.2066115702479, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI2367348, Length=498, Percent_Identity=20.4819277108434, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 54536; Mature: 54536

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNKILPLALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNWDLTKVAWW
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEHHH
REFNDPVLNNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFD
HHCCCHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE
VNSNSNIPQLNNIGTQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLS
CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEHHCCCCHHHHHHHHHHHCCCCHHHHHH
IISQVSAAYFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
KGKIAMIKNDIVHFQNTLKILMGRNPGKIVTSRTLNEINANIKVPINMPSQVLENRPDIG
CCCEEEEHHHHHHHHHHHHHEECCCCCCEEEHHHHHHCCCCEEEEECCCHHHHCCCCCCC
IAEYKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFN
EEEEEEEECCCCCEEEHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEE
LSILADSDKAKAQFYQAYYDYINTLQQAFQDVDDSLSERAANAKNLKKQTISLESTQRQE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
KIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALGSGYNVDNYVD
HHHHHHCCCCCCCCHHCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PHYDNPAFDK
CCCCCCCCCC
>Mature Secondary Structure
MIRNKILPLALISATLITSSCSFFNPEYERPKIKAPALWNNQDKNIEVTKNWDLTKVAWW
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEHHH
REFNDPVLNNLITTALKDNNKLQVSIGNILQANAEINKANYGWLPTASVGGGGFVAQAFD
HHCCCHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE
VNSNSNIPQLNNIGTQTTAGSLVGIIPSYTINIARQFKLGEISRLSKKMQTNLKDTTRLS
CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEHHCCCCHHHHHHHHHHHCCCCHHHHHH
IISQVSAAYFSLITAKEQLKLQTLMVNQLNLMFKYAQNQHKLGATSPMLEEVIRQQLEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
KGKIAMIKNDIVHFQNTLKILMGRNPGKIVTSRTLNEINANIKVPINMPSQVLENRPDIG
CCCEEEEHHHHHHHHHHHHHEECCCCCCEEEHHHHHHCCCCEEEEECCCHHHHCCCCCCC
IAEYKLETANANIGLARSQFFPSIDLTGTFGNATLALGELATMNAWAWAAEAVAAVPVFN
EEEEEEEECCCCCEEEHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEE
LSILADSDKAKAQFYQAYYDYINTLQQAFQDVDDSLSERAANAKNLKKQTISLESTQRQE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
KIFFKKYSSGAISKAQYTGITLNVLYQQMQVNQTKLKSLISVVNLYQALGSGYNVDNYVD
HHHHHHCCCCCCCCHHCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PHYDNPAFDK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]