Click here to switch to the map view.

The map label for this gene is potH [H]

Identifier: 89256070

GI number: 89256070

Start: 667164

End: 668045

Strand: Reverse

Name: potH [H]

Synonym: FTL_0680

Alternate gene names: 89256070

Gene position: 668045-667164 (Counterclockwise)

Preceding gene: 89256071

Following gene: 89256069

Centisome position: 35.23

GC content: 32.99

Gene sequence:

>882_bases
ATGCAAAACTTAGAAAAAAGCTTTAGACATACTTTAGTTTATCTAATTCCTTTTATATGGTTTGTAGTTTTTCTGCTTAT
ACCATTTTTATTTGTCGTAGGTATTAGCTTTACTTTACCCGCTGATGGTACTCCGCCTGTTACTTCGTTGATGACTTATA
AACAATCAGCACTACACTTTACGCTATATCTAAGTAATTATATTGAGCTGATTCATTATAATCTAATATTCATATCATTA
CTTAAATCTTTTAAAGTTGCTTTTATAACTACAGTATTGTGTATTTTAATCGGTTATCCGATGGCATTAGCATTATCAAA
AGCCAAAAAGAACACCCAGATTTTCTTTTTAGTTCTAATTATCATTCCATACTGGACCTCATTTCTACTTAGAACATATG
CGTGGGTGACATTACTAGGTAACCATACCTTAAATCAATTTCTAATGGATTTAGGCTTACCAAGCATGGCTTTACTTTAC
AATGATTTTTCGATGTATTTAGGTATGGTTTATTGTTACTTACCATTTCTAGTGTTACCACTGTATAGCACTCTAATTAA
AATCGATCCTAGTATCTATGATGCTGCTGAGGATTTAGGCTCTAGGCCGATTAATTCTTTCTTTAAGATAACACTACCAT
TATCAATGCCTGGGCTAATTGCTGGCAGCTTGTTAATATTTATCCCAGCTATTGGTGAAGTAGTTGTGCCACAAATTATG
GGTGGTATGGATTCATTAATGATTGGTAATGTTATTTGGGAAGAGTTTTTCACATCTAATAATTGGGGTATGGCAGCTAC
GATATCCGTAGTTTTAATAGTTATACTAGTTTTACCTATCCTATGGATGCAACGCATTCAAGCAAAGCGAACTTTTGTTT
AG

Upstream 100 bases:

>100_bases
CTACTGATTTCAATATTGAGAGAAATGCAGATCATCCTTCTTGGGATGATGAAGTATATCTCACTTGGGAATCAGAAAAT
ATCATGGTGCTATACTCATA

Downstream 100 bases:

>100_bases
GAGGATATGAGCGATGAAAAGATTTTCATTTAGTAAGATAATGCTTATATTAGGTTTGATCTTTTTATATATTCCACTAA
TAATTTTAGTGGTTTTCTCA

Product: polyamine transporter, subunit H, ABC transporter, membrane protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAATISVVLIVILVLPILWMQRIQAKRTFV

Sequences:

>Translated_293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAATISVVLIVILVLPILWMQRIQAKRTFV
>Mature_293_residues
MQNLEKSFRHTLVYLIPFIWFVVFLLIPFLFVVGISFTLPADGTPPVTSLMTYKQSALHFTLYLSNYIELIHYNLIFISL
LKSFKVAFITTVLCILIGYPMALALSKAKKNTQIFFLVLIIIPYWTSFLLRTYAWVTLLGNHTLNQFLMDLGLPSMALLY
NDFSMYLGMVYCYLPFLVLPLYSTLIKIDPSIYDAAEDLGSRPINSFFKITLPLSMPGLIAGSLLIFIPAIGEVVVPQIM
GGMDSLMIGNVIWEEFFTSNNWGMAATISVVLIVILVLPILWMQRIQAKRTFV

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=292, Percent_Identity=43.1506849315069, Blast_Score=245, Evalue=3e-66,
Organism=Escherichia coli, GI1787369, Length=277, Percent_Identity=35.3790613718412, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1787713, Length=224, Percent_Identity=29.4642857142857, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33273; Mature: 33273

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]