Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256045
Identifier: 89256045
GI number: 89256045
Start: 637263
End: 638012
Strand: Direct
Name: 89256045
Synonym: FTL_0654
Alternate gene names: NA
Gene position: 637263-638012 (Clockwise)
Preceding gene: 89256044
Following gene: 89256046
Centisome position: 33.61
GC content: 29.07
Gene sequence:
>750_bases ATGAAAATACTAGTTTGTCGCCCTCATAATGATGCTGTCAATTTAACAGAAAAACTCTGTGCAAATGGTCTTTTAGCGGT AAGTTTACCAACTATCAAAATTTGTTATCAAAAAATTACTGAGAGTGTTCTTGACTATACAAGTCTAGTTTTTACTAGTA AATATGCTGTTGAAAGCTTGTTTAGTCAATATCCAATCGATTTGTTTAAAAATAAAAAGATCTATAGTGTCGGTGCCAGT ACTGCTGCTATATTAGAAAAATACCAATTAGCTGCAATATATCCAGTTAGACATGGCTCACAAGAACTTTTAGATATCAT ATTAAATCAAGATATTTCTAAAGAAAAATTTGCGATTATTTCTGGTGTCTCTGGTAATGATCTTTTGCTTGAAGAGTTAT CAAAATTAACACACTGTCATAAATTTGAGACGTATTTACGAGTTTTTATAGATCTTTATGAGTTGTTAGATACTTATAAT AAACTTTTTTTACATAATCAGCCGGATATTATAATTGCTACAAGTCTTGATGTTTTTAAATCATTAAATAGAATTTTCGA AAAAATAACTACTCCAAAGGCTGCAACAATTACCATAACAAGCCTAAAAATGCTAAAATTTGTTAATCAACAAGGCTTTA AAAATACCTTAAAACTTGAGAAACTAGATAATAGTTATATCTGTCAAAGAATACTAGAATTTACAGAGGCAAAAGATGTC AATAGAAAAAAACACCCAGCAACAAAGTAG
Upstream 100 bases:
>100_bases TAAGCAGATAGGTTTTGGTAATAATTTAAGTACAACACGTGCCAATGGCTTAAAATCAATGCTTGATTATATATATGCTA CAGCTAAACAAAATCAGTAA
Downstream 100 bases:
>100_bases CACTCAGGATAATCCAGCTAAAAAAACAGCAAGAGTAGATAATAAATCTTCAATAGGAGGGGTATTTGCTAAGATTACCT TAGCGGTATCTATAGCTGCA
Product: uroporphyrinogen III synthase
Products: uroporphyrinogen III; H2O
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVLDYTSLVFTSKYAVESLFSQYPIDLFKNKKIYSVGAS TAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKFAIISGVSGNDLLLEELSKLTHCHKFETYLRVFIDLYELLDTYN KLFLHNQPDIIIATSLDVFKSLNRIFEKITTPKAATITITSLKMLKFVNQQGFKNTLKLEKLDNSYICQRILEFTEAKDV NRKKHPATK
Sequences:
>Translated_249_residues MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVLDYTSLVFTSKYAVESLFSQYPIDLFKNKKIYSVGAS TAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKFAIISGVSGNDLLLEELSKLTHCHKFETYLRVFIDLYELLDTYN KLFLHNQPDIIIATSLDVFKSLNRIFEKITTPKAATITITSLKMLKFVNQQGFKNTLKLEKLDNSYICQRILEFTEAKDV NRKKHPATK >Mature_249_residues MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVLDYTSLVFTSKYAVESLFSQYPIDLFKNKKIYSVGAS TAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKFAIISGVSGNDLLLEELSKLTHCHKFETYLRVFIDLYELLDTYN KLFLHNQPDIIIATSLDVFKSLNRIFEKITTPKAATITITSLKMLKFVNQQGFKNTLKLEKLDNSYICQRILEFTEAKDV NRKKHPATK
Specific function: Unknown
COG id: COG1587
COG function: function code H; Uroporphyrinogen-III synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.75
Molecular weight: Translated: 28403; Mature: 28403
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVLDYTSLVFTSKYAVESL CEEEEECCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKFAII HHHCCHHHHCCCEEEEECCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCEEEE SGVSGNDLLLEELSKLTHCHKFETYLRVFIDLYELLDTYNKLFLHNQPDIIIATSLDVFK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH SLNRIFEKITTPKAATITITSLKMLKFVNQQGFKNTLKLEKLDNSYICQRILEFTEAKDV HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC NRKKHPATK CCCCCCCCC >Mature Secondary Structure MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVLDYTSLVFTSKYAVESL CEEEEECCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKFAII HHHCCHHHHCCCEEEEECCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCEEEE SGVSGNDLLLEELSKLTHCHKFETYLRVFIDLYELLDTYNKLFLHNQPDIIIATSLDVFK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH SLNRIFEKITTPKAATITITSLKMLKFVNQQGFKNTLKLEKLDNSYICQRILEFTEAKDV HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC NRKKHPATK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydroxymethylbilane
Specific reaction: hydroxymethylbilane = uroporphyrinogen III + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA