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The map label for this gene is ybdL [H]

Identifier: 89256040

GI number: 89256040

Start: 630712

End: 631191

Strand: Reverse

Name: ybdL [H]

Synonym: FTL_0649

Alternate gene names: 89256040

Gene position: 631191-630712 (Counterclockwise)

Preceding gene: 89256041

Following gene: 89256039

Centisome position: 33.29

GC content: 34.58

Gene sequence:

>480_bases
ATGATCCAAGCGAAATCTTATATCGACACTACGCCATCTGTATATGGCAAATTTGCTTTGATGGCAAATGAGTATAAAGC
TTTAAATTTTACTCAAGGAGCTCCTGATTTTGATACTCCCGAGTGGTTAATTGAACGTACAAACTTTTATATACAGCATG
GCAAAAACCAATACTCTCCAATTCCAGGAGCTGTCGCACTACGTAATGCAATAGTACAAAAAACTAAACGATGCTATAAC
ACAGATATAACCATCGATAATGTAGCTATTACTGCAGGTGCTCAAGAAGGCTTGTTCTGTATAATTTCTGCTTATGTTGG
TCAAGGTGATGAAGTTATTATGTTTGATCCCATATTTTATACTTATGCCGGAGTCACAAAATTTAATCAAGGTAAATGTG
TCAGACTGAAACTACTACCAAATGGTAAAATTGATATAAACGTATTGCAAATGCTATTACAAATCGTACTAAACTCATAA

Upstream 100 bases:

>100_bases
AAATACTTTTATTATCAACAATAAATCAACGAATAAAGCTAAATTTATCTAACGATTTATACTATAATCTTAACTATTAT
CTTCATAACTAAAAAATATT

Downstream 100 bases:

>100_bases
TTCTAAACTCTCCTCATAATCCTATGGGAACAGTTATATCTAAAGATGAATTCAAAGAAATTGCAAAAATTGTCAAAGAT
AAAGACATTTTAGTAATCTC

Product: aspartate/tyrosine/aromatic aminotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIQAKSYIDTTPSVYGKFALMANEYKALNFTQGAPDFDTPEWLIERTNFYIQHGKNQYSPIPGAVALRNAIVQKTKRCYN
TDITIDNVAITAGAQEGLFCIISAYVGQGDEVIMFDPIFYTYAGVTKFNQGKCVRLKLLPNGKIDINVLQMLLQIVLNS

Sequences:

>Translated_159_residues
MIQAKSYIDTTPSVYGKFALMANEYKALNFTQGAPDFDTPEWLIERTNFYIQHGKNQYSPIPGAVALRNAIVQKTKRCYN
TDITIDNVAITAGAQEGLFCIISAYVGQGDEVIMFDPIFYTYAGVTKFNQGKCVRLKLLPNGKIDINVLQMLLQIVLNS
>Mature_159_residues
MIQAKSYIDTTPSVYGKFALMANEYKALNFTQGAPDFDTPEWLIERTNFYIQHGKNQYSPIPGAVALRNAIVQKTKRCYN
TDITIDNVAITAGAQEGLFCIISAYVGQGDEVIMFDPIFYTYAGVTKFNQGKCVRLKLLPNGKIDINVLQMLLQIVLNS

Specific function: Shows aminotransferase activity with methionine and histidine as substrates, and to a lesser extent also with phenylalanine [H]

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1786816, Length=154, Percent_Identity=37.6623376623377, Blast_Score=111, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6322401, Length=119, Percent_Identity=31.0924369747899, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573069, Length=135, Percent_Identity=32.5925925925926, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24646114, Length=135, Percent_Identity=32.5925925925926, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28573067, Length=135, Percent_Identity=32.5925925925926, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28573065, Length=135, Percent_Identity=32.5925925925926, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 17770; Mature: 17770

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAKSYIDTTPSVYGKFALMANEYKALNFTQGAPDFDTPEWLIERTNFYIQHGKNQYSP
CCCCCCCCCCCHHHHEEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCCC
IPGAVALRNAIVQKTKRCYNTDITIDNVAITAGAQEGLFCIISAYVGQGDEVIMFDPIFY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEHHCCCCCEEEECCHHH
TYAGVTKFNQGKCVRLKLLPNGKIDINVLQMLLQIVLNS
HHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQAKSYIDTTPSVYGKFALMANEYKALNFTQGAPDFDTPEWLIERTNFYIQHGKNQYSP
CCCCCCCCCCCHHHHEEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCCC
IPGAVALRNAIVQKTKRCYNTDITIDNVAITAGAQEGLFCIISAYVGQGDEVIMFDPIFY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEHHCCCCCEEEECCHHH
TYAGVTKFNQGKCVRLKLLPNGKIDINVLQMLLQIVLNS
HHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]