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The map label for this gene is ybdL [H]

Identifier: 89256039

GI number: 89256039

Start: 630059

End: 630688

Strand: Reverse

Name: ybdL [H]

Synonym: FTL_0648

Alternate gene names: 89256039

Gene position: 630688-630059 (Counterclockwise)

Preceding gene: 89256040

Following gene: 89256038

Centisome position: 33.26

GC content: 34.6

Gene sequence:

>630_bases
ATGGGAACAGTTATATCTAAAGATGAATTCAAAGAAATTGCAAAAATTGTCAAAGATAAAGACATTTTAGTAATCTCTGA
TGAAGTTTATGAACATATATACGCAGGAGAGAGTTTTATAAGTGCTATACAAATACCAGAGCTACATCATAAGCTAGTAG
TGTTCCAATCTCTTGGCAAGACTTACAATGTTACTGGCTGGCGCCAAGGTGTAACAATCGCCCCACCACAAGTGATACAG
AATATGCTCGCAATAAAACAGTTTGCAACATTCTCTGCAGTACATCTAATGCAATTAGCCTTAGCTGAGGGGATACTAGA
ACATCCTGAATATTATGAAAATCTGCATAAACTCTACAAAAAGCAAAATCAGTTATTAAGAGAGCACTTAAAAGGTACAA
GATTCAAAATCCTTGACTGGCAAGGCTCACCTTTTCAAATTCTTGACTATAGTAATATAAGTAATCAAGATGGTGATAAA
TTTGCTAGTAATTTGATCAAAGAACATAGTGTTGGTTTAGTGCCAATATCATCACTTTTTGAGACTCCTCAAGATGGTCT
TTTAAGACTATGCTTTGCCAAAAAAGATCACGACATAATCAAAGGAGCTAAAATCCTAGCGAATATCTAA

Upstream 100 bases:

>100_bases
GACTGAAACTACTACCAAATGGTAAAATTGATATAAACGTATTGCAAATGCTATTACAAATCGTACTAAACTCATAATTC
TAAACTCTCCTCATAATCCT

Downstream 100 bases:

>100_bases
TGCAAAAAAACTCTAAAATAAATCACCAATACTATCTTAGGTTTTTTGGTAAATTTTGGGTAATTTTAGTGGGAAATATC
AAAAATAGAATTTTTAAATT

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGTVISKDEFKEIAKIVKDKDILVISDEVYEHIYAGESFISAIQIPELHHKLVVFQSLGKTYNVTGWRQGVTIAPPQVIQ
NMLAIKQFATFSAVHLMQLALAEGILEHPEYYENLHKLYKKQNQLLREHLKGTRFKILDWQGSPFQILDYSNISNQDGDK
FASNLIKEHSVGLVPISSLFETPQDGLLRLCFAKKDHDIIKGAKILANI

Sequences:

>Translated_209_residues
MGTVISKDEFKEIAKIVKDKDILVISDEVYEHIYAGESFISAIQIPELHHKLVVFQSLGKTYNVTGWRQGVTIAPPQVIQ
NMLAIKQFATFSAVHLMQLALAEGILEHPEYYENLHKLYKKQNQLLREHLKGTRFKILDWQGSPFQILDYSNISNQDGDK
FASNLIKEHSVGLVPISSLFETPQDGLLRLCFAKKDHDIIKGAKILANI
>Mature_208_residues
GTVISKDEFKEIAKIVKDKDILVISDEVYEHIYAGESFISAIQIPELHHKLVVFQSLGKTYNVTGWRQGVTIAPPQVIQN
MLAIKQFATFSAVHLMQLALAEGILEHPEYYENLHKLYKKQNQLLREHLKGTRFKILDWQGSPFQILDYSNISNQDGDKF
ASNLIKEHSVGLVPISSLFETPQDGLLRLCFAKKDHDIIKGAKILANI

Specific function: Shows aminotransferase activity with methionine and histidine as substrates, and to a lesser extent also with phenylalanine [H]

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=228, Percent_Identity=27.1929824561404, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI56713256, Length=228, Percent_Identity=27.1929824561404, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI169881281, Length=220, Percent_Identity=25, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI95147551, Length=220, Percent_Identity=25, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI169881279, Length=220, Percent_Identity=25, Blast_Score=84, Evalue=7e-17,
Organism=Escherichia coli, GI1786816, Length=207, Percent_Identity=35.2657004830918, Blast_Score=137, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI71994472, Length=230, Percent_Identity=25.2173913043478, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=233, Percent_Identity=24.8927038626609, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17567369, Length=232, Percent_Identity=25.4310344827586, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28573069, Length=231, Percent_Identity=25.974025974026, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24646114, Length=231, Percent_Identity=25.974025974026, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573067, Length=231, Percent_Identity=25.974025974026, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573065, Length=231, Percent_Identity=25.974025974026, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 23729; Mature: 23598

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVISKDEFKEIAKIVKDKDILVISDEVYEHIYAGESFISAIQIPELHHKLVVFQSLGK
CCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCC
TYNVTGWRQGVTIAPPQVIQNMLAIKQFATFSAVHLMQLALAEGILEHPEYYENLHKLYK
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KQNQLLREHLKGTRFKILDWQGSPFQILDYSNISNQDGDKFASNLIKEHSVGLVPISSLF
HHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHH
ETPQDGLLRLCFAKKDHDIIKGAKILANI
CCCHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GTVISKDEFKEIAKIVKDKDILVISDEVYEHIYAGESFISAIQIPELHHKLVVFQSLGK
CCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCC
TYNVTGWRQGVTIAPPQVIQNMLAIKQFATFSAVHLMQLALAEGILEHPEYYENLHKLYK
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KQNQLLREHLKGTRFKILDWQGSPFQILDYSNISNQDGDKFASNLIKEHSVGLVPISSLF
HHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHH
ETPQDGLLRLCFAKKDHDIIKGAKILANI
CCCHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]