Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is cdr [H]
Identifier: 89256026
GI number: 89256026
Start: 621339
End: 621959
Strand: Direct
Name: cdr [H]
Synonym: FTL_0635
Alternate gene names: 89256026
Gene position: 621339-621959 (Clockwise)
Preceding gene: 89256025
Following gene: 89256027
Centisome position: 32.77
GC content: 34.46
Gene sequence:
>621_bases ATGACTCCGGAGAAGTTTGATAAACAATATAATATCGATGCACGTACAAACTCTGAGGTTATAGCTATTGATAGGATAAA TAAGCTCGTAACTGTTATAAATCACCATAGTGGTGACAAATATAGCGAAAGTTATGATAAGTTAATCTTGGCTGTTGGAG CTAAGCTGATAGTGCCACCATTTAAGGGGTTAGAGACTATTGAGCATTTTATCCTTAGAAATGTTGTTGATGTCAAAAAG ATTCATCAAGCAGTTTTTGATAAACAAAAGCCTGTCAAAGATATAACAGTAATTGGCGCTGGCTTTATCGGTGTTGAGGT TGCAGAAAATCTCAAAGAAAAAGGCTTTAATGTAACTATAATCGAGATGGCTAATCAGATTATGCGACCTTTTGATTATG AAATGGCAAAATTCTTAGAGAAAGAGCTACTAGATAATAGTGTTAATCTACTACTTGGTGAAAAAGTTGTTGGCTTTGAA TCTGATAAGGTCTTACTTGAGTCAGGTAAAGAGATAAAAACCGATTTGGCTATTTTGGCTATAGGTGTTGCGCCAGATAC TAACTTCCTAAAAGAAGTAGGTATTGATTTAGCAAAAACTGGTCATATTCATTGTAAATGA
Upstream 100 bases:
>100_bases GATTATCATATTTGAGAAAGGTCCACATGTGTCATTCTAAAACTGTGGTTTACCATATCATCTAGGTGGTTATATTGAGA CAGCTGAAAAGCTGATTTTG
Downstream 100 bases:
>100_bases TAACTATCAAACATCTGATGAAAATATCTATGCCGCTGGTGATGCTATTTTGGTCAAAAATGCTCTTACATCTCAGGATT TCAATTTACCTTTGGCAGGT
Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTPEKFDKQYNIDARTNSEVIAIDRINKLVTVINHHSGDKYSESYDKLILAVGAKLIVPPFKGLETIEHFILRNVVDVKK IHQAVFDKQKPVKDITVIGAGFIGVEVAENLKEKGFNVTIIEMANQIMRPFDYEMAKFLEKELLDNSVNLLLGEKVVGFE SDKVLLESGKEIKTDLAILAIGVAPDTNFLKEVGIDLAKTGHIHCK
Sequences:
>Translated_206_residues MTPEKFDKQYNIDARTNSEVIAIDRINKLVTVINHHSGDKYSESYDKLILAVGAKLIVPPFKGLETIEHFILRNVVDVKK IHQAVFDKQKPVKDITVIGAGFIGVEVAENLKEKGFNVTIIEMANQIMRPFDYEMAKFLEKELLDNSVNLLLGEKVVGFE SDKVLLESGKEIKTDLAILAIGVAPDTNFLKEVGIDLAKTGHIHCK >Mature_205_residues TPEKFDKQYNIDARTNSEVIAIDRINKLVTVINHHSGDKYSESYDKLILAVGAKLIVPPFKGLETIEHFILRNVVDVKKI HQAVFDKQKPVKDITVIGAGFIGVEVAENLKEKGFNVTIIEMANQIMRPFDYEMAKFLEKELLDNSVNLLLGEKVVGFES DKVLLESGKEIKTDLAILAIGVAPDTNFLKEVGIDLAKTGHIHCK
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=210, Percent_Identity=29.0476190476191, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI226437568, Length=210, Percent_Identity=29.0476190476191, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI65787454, Length=210, Percent_Identity=29.0476190476191, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1789065, Length=203, Percent_Identity=26.6009852216749, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788892, Length=200, Percent_Identity=24.5, Blast_Score=70, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17559934, Length=210, Percent_Identity=30.952380952381, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24639257, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI281359715, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI281359713, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639250, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI18543267, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639252, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 23017; Mature: 22886
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEKFDKQYNIDARTNSEVIAIDRINKLVTVINHHSGDKYSESYDKLILAVGAKLIVPP CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCC FKGLETIEHFILRNVVDVKKIHQAVFDKQKPVKDITVIGAGFIGVEVAENLKEKGFNVTI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEH IEMANQIMRPFDYEMAKFLEKELLDNSVNLLLGEKVVGFESDKVLLESGKEIKTDLAILA HHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEECCEEECCCCCHHHHHCCCHHHHCEEEEE IGVAPDTNFLKEVGIDLAKTGHIHCK EECCCCHHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure TPEKFDKQYNIDARTNSEVIAIDRINKLVTVINHHSGDKYSESYDKLILAVGAKLIVPP CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCC FKGLETIEHFILRNVVDVKKIHQAVFDKQKPVKDITVIGAGFIGVEVAENLKEKGFNVTI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEH IEMANQIMRPFDYEMAKFLEKELLDNSVNLLLGEKVVGFESDKVLLESGKEIKTDLAILA HHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEECCEEECCCCCHHHHHCCCHHHHCEEEEE IGVAPDTNFLKEVGIDLAKTGHIHCK EECCCCHHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA