| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is manB [H]
Identifier: 89256007
GI number: 89256007
Start: 598318
End: 599802
Strand: Direct
Name: manB [H]
Synonym: FTL_0609
Alternate gene names: 89256007
Gene position: 598318-599802 (Clockwise)
Preceding gene: 89256006
Following gene: 89256010
Centisome position: 31.56
GC content: 35.42
Gene sequence:
>1485_bases ATGAGACAAACTATAATAAAAGAAATAATCAAATCTAGCAGCGTAAAGTTTGGTACTAGTGGAGTTAGAGGTCTTGTTTC AGCTATGACAGATAAGATCTGTTGGCTTTATACAAAAGCTTTTATTCAATTCCTAGAGCAAAAATACTCTATTGCTAAGG GTACTAAAATTGCTATAGCTCATGATCTACGTGAGAGTAGCCCTAGAATAACAACAGTTGTTATTAAAGCTATCATAGAT AGTGGTCATGAGCCAATATACTGTGGTGAGATACCATCACCAGCTGTAATGCTATATGGTATATCTAATCAGATACCGTC AGTTATGGTTACTGGTAGTCATATTCCAGAGGATAGAAATGGTATTAAGTTTAATACTCCATATGGTGAAGTTCTCAAAG AAGATGAAGAAATGATTGTTAGCCAAACTATCAGCATTGATGAAAGTATTTTTGATAAAAATGGCATGTTTTTACAAAAA CTAGAATTACCAGAGCCTAGTAAGCAAGCATATACACAGTATATTGACAGGTATGTAGATTTTTTCCCTAACAACTGTCT AGCAGGTAAGACTATAGGGCTTTATCAGCACTCATCTGTAGGGCGAGAGATAGTCAAAGAGATTCTAGAGAAACTAGGTG CTAAGGTTATCTTGCTAGAATTTTCCGAAAAATTTGTATCTGTAGATACCGAGGCAATTCGCCAGGAAGATGTAAAGCTT GCTAAGCAGTGGGCAAGCAAGTATAAAGTTGATAGTATAGTTTCAACTGATGGCGATGCTGATAGGCCACTAGTTAGTGA TGAGTATGGCAATTGGCTAAAAGGTGATATTTTAGGTGTACTGACAGCTAAATATCTCCAAGCCAATGTTATCGTGACAC CAGTAAGTAGCAATACTGTGGCAGAAAAGATAGGTTATTTTAGTAACGTGATTAGAACTAAAATAGGCTCGCCGTATGTA ATTGCTGCAATGAATGAATTACTCTCAAATAATCAAAATGCTGTGGTTGGATATGAGGCAAATGGAGGATTTCTATTGGC TAGTGATATTTGTAAAGATGATAAAACTCTAAAAGCGCTGCCTACAAGAGATGCTGTTATACCAATGTTGGCTGTAATGA TGCTATCTATCAACTCTAATAAAACCGTGTCAGAGCTTTTATTTGATTTGCCATCTCGATATACAGCAAGTAGTAAAATT GATGATTTTGCTTCCGAGAAAAGCCAAGAAATCTTGAAGTCAATATTAGCAGGCGAATCAGATCTTTTAGATAAAATTAT ATCGGAGCATTTTGATGGTAAAAATAGCATTGAAAATATCGATACTACAGATGGTGTTAGAGTAACTTTGACAAATCAAG ATATTATCCATCTTAGACCATCTGGTAATGCTCCAGAGTTTAGGTGCTATACAGAGGCAGCTAGTGATGAGCAAGCAAAA AGTTTAAATCAATATTGTGTGGATTTGATTAACAAAAACATTTGA
Upstream 100 bases:
>100_bases TCTTATAGAAGTACAAGTTGGAGAATATATAAGTGAAGACGATATTGTTAGACTATATACAAGTAGTTAATATAAAAACA ATTAGATAGAAAAAAATATA
Downstream 100 bases:
>100_bases AGATCAGTCAAAAATATTCCCTAACTTTTCTCTTCACCATTGAACCATTACTAACCTTATCTATAGCTAGCCACAGATAA AAATGTCATGCTGGATTTAT
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MRQTIIKEIIKSSSVKFGTSGVRGLVSAMTDKICWLYTKAFIQFLEQKYSIAKGTKIAIAHDLRESSPRITTVVIKAIID SGHEPIYCGEIPSPAVMLYGISNQIPSVMVTGSHIPEDRNGIKFNTPYGEVLKEDEEMIVSQTISIDESIFDKNGMFLQK LELPEPSKQAYTQYIDRYVDFFPNNCLAGKTIGLYQHSSVGREIVKEILEKLGAKVILLEFSEKFVSVDTEAIRQEDVKL AKQWASKYKVDSIVSTDGDADRPLVSDEYGNWLKGDILGVLTAKYLQANVIVTPVSSNTVAEKIGYFSNVIRTKIGSPYV IAAMNELLSNNQNAVVGYEANGGFLLASDICKDDKTLKALPTRDAVIPMLAVMMLSINSNKTVSELLFDLPSRYTASSKI DDFASEKSQEILKSILAGESDLLDKIISEHFDGKNSIENIDTTDGVRVTLTNQDIIHLRPSGNAPEFRCYTEAASDEQAK SLNQYCVDLINKNI
Sequences:
>Translated_494_residues MRQTIIKEIIKSSSVKFGTSGVRGLVSAMTDKICWLYTKAFIQFLEQKYSIAKGTKIAIAHDLRESSPRITTVVIKAIID SGHEPIYCGEIPSPAVMLYGISNQIPSVMVTGSHIPEDRNGIKFNTPYGEVLKEDEEMIVSQTISIDESIFDKNGMFLQK LELPEPSKQAYTQYIDRYVDFFPNNCLAGKTIGLYQHSSVGREIVKEILEKLGAKVILLEFSEKFVSVDTEAIRQEDVKL AKQWASKYKVDSIVSTDGDADRPLVSDEYGNWLKGDILGVLTAKYLQANVIVTPVSSNTVAEKIGYFSNVIRTKIGSPYV IAAMNELLSNNQNAVVGYEANGGFLLASDICKDDKTLKALPTRDAVIPMLAVMMLSINSNKTVSELLFDLPSRYTASSKI DDFASEKSQEILKSILAGESDLLDKIISEHFDGKNSIENIDTTDGVRVTLTNQDIIHLRPSGNAPEFRCYTEAASDEQAK SLNQYCVDLINKNI >Mature_494_residues MRQTIIKEIIKSSSVKFGTSGVRGLVSAMTDKICWLYTKAFIQFLEQKYSIAKGTKIAIAHDLRESSPRITTVVIKAIID SGHEPIYCGEIPSPAVMLYGISNQIPSVMVTGSHIPEDRNGIKFNTPYGEVLKEDEEMIVSQTISIDESIFDKNGMFLQK LELPEPSKQAYTQYIDRYVDFFPNNCLAGKTIGLYQHSSVGREIVKEILEKLGAKVILLEFSEKFVSVDTEAIRQEDVKL AKQWASKYKVDSIVSTDGDADRPLVSDEYGNWLKGDILGVLTAKYLQANVIVTPVSSNTVAEKIGYFSNVIRTKIGSPYV IAAMNELLSNNQNAVVGYEANGGFLLASDICKDDKTLKALPTRDAVIPMLAVMMLSINSNKTVSELLFDLPSRYTASSKI DDFASEKSQEILKSILAGESDLLDKIISEHFDGKNSIENIDTTDGVRVTLTNQDIIHLRPSGNAPEFRCYTEAASDEQAK SLNQYCVDLINKNI
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS group C2 O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=505, Percent_Identity=23.3663366336634, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 54706; Mature: 54706
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQTIIKEIIKSSSVKFGTSGVRGLVSAMTDKICWLYTKAFIQFLEQKYSIAKGTKIAIA CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE HDLRESSPRITTVVIKAIIDSGHEPIYCGEIPSPAVMLYGISNQIPSVMVTGSHIPEDRN EHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCC GIKFNTPYGEVLKEDEEMIVSQTISIDESIFDKNGMFLQKLELPEPSKQAYTQYIDRYVD CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH FFPNNCLAGKTIGLYQHSSVGREIVKEILEKLGAKVILLEFSEKFVSVDTEAIRQEDVKL HCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHHHHH AKQWASKYKVDSIVSTDGDADRPLVSDEYGNWLKGDILGVLTAKYLQANVIVTPVSSNTV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH AEKIGYFSNVIRTKIGSPYVIAAMNELLSNNQNAVVGYEANGGFLLASDICKDDKTLKAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCEECC PTRDAVIPMLAVMMLSINSNKTVSELLFDLPSRYTASSKIDDFASEKSQEILKSILAGES CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH DLLDKIISEHFDGKNSIENIDTTDGVRVTLTNQDIIHLRPSGNAPEFRCYTEAASDEQAK HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCHHHHH SLNQYCVDLINKNI HHHHHHHHHHHCCC >Mature Secondary Structure MRQTIIKEIIKSSSVKFGTSGVRGLVSAMTDKICWLYTKAFIQFLEQKYSIAKGTKIAIA CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE HDLRESSPRITTVVIKAIIDSGHEPIYCGEIPSPAVMLYGISNQIPSVMVTGSHIPEDRN EHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCC GIKFNTPYGEVLKEDEEMIVSQTISIDESIFDKNGMFLQKLELPEPSKQAYTQYIDRYVD CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH FFPNNCLAGKTIGLYQHSSVGREIVKEILEKLGAKVILLEFSEKFVSVDTEAIRQEDVKL HCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHHHHHHHHHH AKQWASKYKVDSIVSTDGDADRPLVSDEYGNWLKGDILGVLTAKYLQANVIVTPVSSNTV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH AEKIGYFSNVIRTKIGSPYVIAAMNELLSNNQNAVVGYEANGGFLLASDICKDDKTLKAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCEECC PTRDAVIPMLAVMMLSINSNKTVSELLFDLPSRYTASSKIDDFASEKSQEILKSILAGES CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH DLLDKIISEHFDGKNSIENIDTTDGVRVTLTNQDIIHLRPSGNAPEFRCYTEAASDEQAK HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCHHHHH SLNQYCVDLINKNI HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379320 [H]