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The map label for this gene is wcaJ [H]

Identifier: 89255991

GI number: 89255991

Start: 579955

End: 580587

Strand: Direct

Name: wcaJ [H]

Synonym: FTL_0593

Alternate gene names: 89255991

Gene position: 579955-580587 (Clockwise)

Preceding gene: 89255990

Following gene: 89255992

Centisome position: 30.59

GC content: 32.39

Gene sequence:

>633_bases
ATGGGTAGTGGTTTTATGTTTTATAAGGTTTTTAAAAGATTGCTTGATATTTTACTTTCTTTTATGGGGTTGTTGTTATT
AAGTCCTATTTTCTTAATTATTATTTTTATGATAAAGAAAGATTCAAAAGGACCTATATTTTTTAAACAAAAGCGATATG
GTAAAGATAAGCAATTTTTTTACATATATAAGTTTAGAACTATGTATGTTGATACTCCAAAAGATATGCCAACGCACATG
TTACAGGATCCATCGAAATGTATAACTAAGGTTGGAGGATTTTTAAGGAAATCATCTTTAGATGAGTTGCCACAAATTAT
AAATATTCTAAAAGGTGAAATGAGCATCGTGGGTCCAAGACCAGCATTATGGAATCAAGATGACTTAATAGCACAAAGAG
ATAAGTATGGGGCAAATGCTGTGCCTGTGGGACTGACTGGCTGGGCACAGATTAATGGTAGGGATGAATTACCAATACCT
GATAAAGCTAAACTTGATGGTGATTATGTAAAAAATAAAAGTACATGGTTTGATTTAAAATGTATTTTTTTGACAGTATT
TTCTGTTTTTGCCAAAAAGGGCGTCGTTGAGGGTGGTACTGGAGCTTTAGGTAACAAAGGGGATTTAAAGTAG

Upstream 100 bases:

>100_bases
ATTAATACTCTAAACCAAGATATTGAATCGTTGATCAAGGATGATGTTGATCAGCTTGTGATATTAAAGAAAATTGTTCC
GGAATTTGAACATAGATTGA

Downstream 100 bases:

>100_bases
TATGAAAAAAAGAATCTTAGTTACAGGTTTGAGTAGCTATATTGGTAACTCATTTGCGGCTAAATATAACTCAGATTTTA
GTATCGATAAAATATCTTTG

Product: galactosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHM
LQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIP
DKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGGTGALGNKGDLK

Sequences:

>Translated_210_residues
MGSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHM
LQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIP
DKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGGTGALGNKGDLK
>Mature_209_residues
GSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHML
QDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIPD
KAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGGTGALGNKGDLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=199, Percent_Identity=41.7085427135678, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 23778; Mature: 23647

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCEE
YIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPR
EEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCC
PALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIPDKAKLDGDYVKNKSTWFDLK
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEHHH
CIFLTVFSVFAKKGVVEGGTGALGNKGDLK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCEE
YIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPR
EEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCC
PALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIPDKAKLDGDYVKNKSTWFDLK
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEHHH
CIFLTVFSVFAKKGVVEGGTGALGNKGDLK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]