| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255969
Identifier: 89255969
GI number: 89255969
Start: 549517
End: 550125
Strand: Direct
Name: 89255969
Synonym: FTL_0571
Alternate gene names: NA
Gene position: 549517-550125 (Clockwise)
Preceding gene: 89255968
Following gene: 89255970
Centisome position: 28.98
GC content: 34.81
Gene sequence:
>609_bases ATGAAAAAGAAACTTTTATTTATAACTATATCTGCTAGTTTAGCATTAGCGCTTAGTTCATGTGGCAAAACTACTGTAGC ATATGAGGATCCAAATGGTGTTGATACAACATCAATAAATTTTAGCTCAACAGATTTACAAGCTATCACAAATAAGATGG CTGAAGATATGCTTAACTCACCTGCAGTTAAAAGAATTACTGCTATGGATACACCTACATTATTCTTTAGTAATATCCGT AATGAGACTCGTGAGCATATAAATACGACTATGTTGTCAAACACTGCTCAAACACAGATTATAAAATCGGGGCTATTCCA AGTTACAGATATGTCTCAGATCAAAAATGTTCGAGAGCAGCTTGGCTATCAAGCAAATAGTGGAATGGTTGACCAAGCTA CTGCAACTAAGATTGGGCAGCATATTGGTGCTAGATACATGGTTTATGGCTCTATCCAAGATATTGATAATACTAATGTT GATGGTGATAAGAGATCTAAATTCTTCTTAGCTACACTGAAAATGATGGATCTAAAAACAGGTCTTGTTGTATGGCAAGA TGATAAGCAGATTCGTAAATCTCAAACTAAATCGACTTTTGGTTGGTAA
Upstream 100 bases:
>100_bases TAGTAATTGTATATGTAATGAGTCAAACGCTATTAACTATAACATTATCAATTATTTTTGTTATAATCGCTATATAAGTA ATTTTTTAGTAACATTTTCA
Downstream 100 bases:
>100_bases GATATAAAAAATAGATATCCTTAATTACTATTAGGATCTTAAAAAGGAGAAATTATATGAAAAAGAAAATTTTAACTTCA TTAATTGCCTCATCGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKKKLLFITISASLALALSSCGKTTVAYEDPNGVDTTSINFSSTDLQAITNKMAEDMLNSPAVKRITAMDTPTLFFSNIR NETREHINTTMLSNTAQTQIIKSGLFQVTDMSQIKNVREQLGYQANSGMVDQATATKIGQHIGARYMVYGSIQDIDNTNV DGDKRSKFFLATLKMMDLKTGLVVWQDDKQIRKSQTKSTFGW
Sequences:
>Translated_202_residues MKKKLLFITISASLALALSSCGKTTVAYEDPNGVDTTSINFSSTDLQAITNKMAEDMLNSPAVKRITAMDTPTLFFSNIR NETREHINTTMLSNTAQTQIIKSGLFQVTDMSQIKNVREQLGYQANSGMVDQATATKIGQHIGARYMVYGSIQDIDNTNV DGDKRSKFFLATLKMMDLKTGLVVWQDDKQIRKSQTKSTFGW >Mature_202_residues MKKKLLFITISASLALALSSCGKTTVAYEDPNGVDTTSINFSSTDLQAITNKMAEDMLNSPAVKRITAMDTPTLFFSNIR NETREHINTTMLSNTAQTQIIKSGLFQVTDMSQIKNVREQLGYQANSGMVDQATATKIGQHIGARYMVYGSIQDIDNTNV DGDKRSKFFLATLKMMDLKTGLVVWQDDKQIRKSQTKSTFGW
Specific function: Unknown
COG id: COG3417
COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22452; Mature: 22452
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLLFITISASLALALSSCGKTTVAYEDPNGVDTTSINFSSTDLQAITNKMAEDMLNS CCCEEEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCC PAVKRITAMDTPTLFFSNIRNETREHINTTMLSNTAQTQIIKSGLFQVTDMSQIKNVREQ CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LGYQANSGMVDQATATKIGQHIGARYMVYGSIQDIDNTNVDGDKRSKFFLATLKMMDLKT CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GLVVWQDDKQIRKSQTKSTFGW CEEEECCCHHHHHHHCCCCCCC >Mature Secondary Structure MKKKLLFITISASLALALSSCGKTTVAYEDPNGVDTTSINFSSTDLQAITNKMAEDMLNS CCCEEEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCC PAVKRITAMDTPTLFFSNIRNETREHINTTMLSNTAQTQIIKSGLFQVTDMSQIKNVREQ CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LGYQANSGMVDQATATKIGQHIGARYMVYGSIQDIDNTNVDGDKRSKFFLATLKMMDLKT CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GLVVWQDDKQIRKSQTKSTFGW CEEEECCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA