Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255964
Identifier: 89255964
GI number: 89255964
Start: 541904
End: 542413
Strand: Reverse
Name: 89255964
Synonym: FTL_0560
Alternate gene names: NA
Gene position: 542413-541904 (Counterclockwise)
Preceding gene: 89255965
Following gene: 89255963
Centisome position: 28.61
GC content: 30.2
Gene sequence:
>510_bases ATGCTTAGGAAACTGCTAATAATTATTTTTATTAGTTTACCTTTATTTGGTGTGGCTGAAGAACTAACTTTACAACAAAT AAAATCACAACAAGTTGGTAAAGTACATTTCAGCAAATGGTTTTTTGATGTTTATGATGCGGAGCTTTACAGTGAAAATG GTCATTTTAGCTGGGATAAACCTTTTTTACTCAAAATTCATTATCTCAGAAGTTTTAGTGGTAAGAATATTGCGAATCAT ACGGTCAAAGAAATTGCTGAGCAACATCCACAACTAGCACATACTACCCTTGATAAATACAAAGAAATTTTTACCAGATT AATGCCAGATGTAAAAAATGGCACAAATCTATATGGTTATATGGACAAAGATGGTAATGGATATATCTATTCAGATAAAG GTTTACTTGGTGAAATACCAAATAAAACTCTTTCAAAATATTTTTTTGAAATATGGCTAAGTGATAAATCATCTCATATT AAACTATCAAAACAGTTGAGGGGCTTATGA
Upstream 100 bases:
>100_bases TTCGATAAGCGTTTTCAAAGAATGTGGCGTTTTTATATAAACTCTTGTAGTGCTGCATTCACACATGGTCGTATTGATGT TGTACAACTGGAGATTGTTC
Downstream 100 bases:
>100_bases AGAAATTAATATCTAAAATAGGAGTAATTATTATGGCGCTAGGATTATTTGGCTGCTCTGCTGATATATCAAGTTATAAA GGTGAAGGACCAAAGCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLRKLLIIIFISLPLFGVAEELTLQQIKSQQVGKVHFSKWFFDVYDAELYSENGHFSWDKPFLLKIHYLRSFSGKNIANH TVKEIAEQHPQLAHTTLDKYKEIFTRLMPDVKNGTNLYGYMDKDGNGYIYSDKGLLGEIPNKTLSKYFFEIWLSDKSSHI KLSKQLRGL
Sequences:
>Translated_169_residues MLRKLLIIIFISLPLFGVAEELTLQQIKSQQVGKVHFSKWFFDVYDAELYSENGHFSWDKPFLLKIHYLRSFSGKNIANH TVKEIAEQHPQLAHTTLDKYKEIFTRLMPDVKNGTNLYGYMDKDGNGYIYSDKGLLGEIPNKTLSKYFFEIWLSDKSSHI KLSKQLRGL >Mature_169_residues MLRKLLIIIFISLPLFGVAEELTLQQIKSQQVGKVHFSKWFFDVYDAELYSENGHFSWDKPFLLKIHYLRSFSGKNIANH TVKEIAEQHPQLAHTTLDKYKEIFTRLMPDVKNGTNLYGYMDKDGNGYIYSDKGLLGEIPNKTLSKYFFEIWLSDKSSHI KLSKQLRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19707; Mature: 19707
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLLIIIFISLPLFGVAEELTLQQIKSQQVGKVHFSKWFFDVYDAELYSENGHFSWDK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC PFLLKIHYLRSFSGKNIANHTVKEIAEQHPQLAHTTLDKYKEIFTRLMPDVKNGTNLYGY CHHEEHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE MDKDGNGYIYSDKGLLGEIPNKTLSKYFFEIWLSDKSSHIKLSKQLRGL EECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHCCC >Mature Secondary Structure MLRKLLIIIFISLPLFGVAEELTLQQIKSQQVGKVHFSKWFFDVYDAELYSENGHFSWDK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC PFLLKIHYLRSFSGKNIANHTVKEIAEQHPQLAHTTLDKYKEIFTRLMPDVKNGTNLYGY CHHEEHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE MDKDGNGYIYSDKGLLGEIPNKTLSKYFFEIWLSDKSSHIKLSKQLRGL EECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA