Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89255930
Identifier: 89255930
GI number: 89255930
Start: 501895
End: 502239
Strand: Reverse
Name: 89255930
Synonym: FTL_0523
Alternate gene names: NA
Gene position: 502239-501895 (Counterclockwise)
Preceding gene: 89255937
Following gene: 89255929
Centisome position: 26.49
GC content: 35.07
Gene sequence:
>345_bases ATGAAAAAACAACTTTTTGCAATATCAATCACAACAGCTCTATTAGTACTCAGTGCATGCGGTCAAACAGGACCATTATA TTTGCCTGATGAAGACAAACTAAACTCCGGATCAACTCTTGCAAAATCTGGTTCTAGTATTATAGTTAAGCAAAATCAAC AAAATAATTCCACTTCAACAAGTGATAATCAAAGTGATACCTCAACTAAAGTAGACAATGATCCAACTGCTCCTGTACGC AACAATAATCCAACTACTAGTGAACTATTTGAGGAAGAAAATAACTTCAACTATAACAACAATATCCAGAACTCTCAAAA TGCCGGAGGTACACCAACTCTATAG
Upstream 100 bases:
>100_bases AAATTTTAGCATTTTAGTGTTTAAATAGATAATTGAATTGCCAAACCAAACATTTATTGCTAAATTCTAAACTATAAATA CCTGAACTATTATCTAAACC
Downstream 100 bases:
>100_bases TTGCAAATTATATTAGCCACGATAAAACAACGAAACTTATTTAACATTATTGGTTTACTTTTAAGCCAAAAAATAATAAA ATTGTTGAGATATTGTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIIVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVR NNNPTTSELFEEENNFNYNNNIQNSQNAGGTPTL
Sequences:
>Translated_114_residues MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIIVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVR NNNPTTSELFEEENNFNYNNNIQNSQNAGGTPTL >Mature_114_residues MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIIVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVR NNNPTTSELFEEENNFNYNNNIQNSQNAGGTPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12225; Mature: 12225
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIIVKQNQQNNSTST CCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC SDNQSDTSTKVDNDPTAPVRNNNPTTSELFEEENNFNYNNNIQNSQNAGGTPTL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIIVKQNQQNNSTST CCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC SDNQSDTSTKVDNDPTAPVRNNNPTTSELFEEENNFNYNNNIQNSQNAGGTPTL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA